Pairwise Alignments

Query, 497 a.a., Copper/silver efflux RND transporter, membrane fusion protein CusB from Sphingobium sp. HT1-2

Subject, 354 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  105 bits (263), Expect = 2e-27
 Identities = 93/303 (30%), Positives = 138/303 (45%), Gaps = 14/303 (4%)

Query: 97  ASQALGMRTVAVRRGELASSLTATGTIDFNQRDVAIVQARAGGFVSRVY--GRA--PGDV 152
           A +AL +   AVRR  +A  + A GT   +Q  +A+V   +G  V   +  GR    GDV
Sbjct: 39  ALRALPVEVAAVRRARVADRVEAVGTTRAHQA-IAVVPLASGRIVEMPFPPGRKVNKGDV 97

Query: 153 I---GAGAPLADVLVPEWGGAQTEFLAVRRTGNAALIQAARQRLMLLGMPSGTIASVEQT 209
           +      A  ADV   E    Q    A+ R  +    QA  Q  +   + S   A+  + 
Sbjct: 98  LVRLDDAAQRADVEEAEATLTQVS-RALERARSLRRTQAVAQATVD-DLQSNRAAAAARL 155

Query: 210 GRPHNVIT---ISTPTGGVIKTLNVRGGMTLMAGQTLAEVNGLGTVWLNAAVPEAVAGPL 266
            R H  +    I+ P  G++    +  G  +  G+ L  ++ L +V +  AVPE   G L
Sbjct: 156 DRAHKDLADRVIAAPFAGIVGFRELDVGARVSEGERLTTLDDLSSVDVEFAVPEIHFGRL 215

Query: 267 KPGQAVRAALAAFPGETISGRVSAILPETQADSRTLTVRIELPNRGGRLRPGMFATVSFG 326
           +PG A+ A   AFPG   +G +  I       SR   VR  LPN  G L  G+F  VS  
Sbjct: 216 RPGMAIEATSQAFPGRIFTGAIDRIDSRIGEVSRAFRVRATLPNPQGLLPSGLFLNVSIV 275

Query: 327 GSAQPALLVPSEALIRTGKRTLVMLALDKGRYRPAEVQTGREAGDDTEILAGLSEGEKIV 386
              +PAL+VP EA I+      V+  +  G  R   +  G+  G   E+  GL+EG+++V
Sbjct: 276 IEERPALMVPEEA-IQAEAGGSVVYVIQGGAVRRQPIVLGQRTGTAVEVRDGLAEGDQVV 334

Query: 387 ASG 389
           + G
Sbjct: 335 SRG 337