Pairwise Alignments

Query, 347 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 837 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  235 bits (599), Expect = 4e-66
 Identities = 131/323 (40%), Positives = 192/323 (59%), Gaps = 5/323 (1%)

Query: 13  EDEQQLTDFVSRLEAALSQPIDLDAV-TIFPGASLGVAIFPTDGTTREQIVNNADLAMYR 71
           E +  ++  VSRL  A   P  LD   ++   AS+GVAI+P DG + + ++ NAD AM+R
Sbjct: 504 ESDDSVSLMVSRLREAFDAPFLLDDEGSVRLTASMGVAIYPGDGESGDTLLRNADTAMHR 563

Query: 72  AKDTVGRQTCYYEQSMDDIARARRMIANDLREAIGRGELSLAYQVQKDVATEEVSGYEAL 131
           AK        +Y QS+   +     + + L +AI +    L YQ +  + T +  G+EAL
Sbjct: 564 AKANGRNNYAFYTQSLTLASVEHLKLQSALHDAINKDAFYLVYQPKLALGTGQCVGFEAL 623

Query: 132 LRWHHPRDGWISPAEFIPIAEESGEIVRIGEWVLRHACAEAARW----PKPWRIAVNLSP 187
           LRW  P+ G ISPA FIP+AE  G I  IG WVL+ A  + A+W     +  RI+VN++ 
Sbjct: 624 LRWEDPQLGTISPAIFIPVAENIGLINEIGLWVLKQAATQGAQWLAEGKRFGRISVNVAG 683

Query: 188 VQLMHVDLIQAVTSALLESGLPASRLELEITETAFIADKVRALHVLRQIKALGVSIAIDD 247
            QL        V   L E+GLP   LELE+TE+  ++D +  + VL+Q+  LGV +++DD
Sbjct: 684 PQLQQKQFCAQVKRVLDEAGLPPEYLELEVTESCMMSDPLAVIEVLKQLGELGVELSVDD 743

Query: 248 FGTGYSSLDTLNSFPFDKIKIDKSFLLESETSHQARAIIRAVLALGRSLEVPVLAEGLES 307
           FGTGYSSL+ L   P  K+KID+SF+ +        AI +AV+ALG +L + ++AEG+E+
Sbjct: 744 FGTGYSSLNYLKRLPIHKLKIDQSFIRDIPRDGNNTAIAKAVIALGHALNLCIIAEGVET 803

Query: 308 EEQLRLLRSEGCDEAQGYLWGRP 330
            EQ   L + GCD+AQGYL+ +P
Sbjct: 804 PEQAAFLEAAGCDQAQGYLYSKP 826