Pairwise Alignments

Query, 1031 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1028 a.a., Cation efflux system protein from Pseudomonas fluorescens FW300-N1B4

 Score =  711 bits (1835), Expect = 0.0
 Identities = 403/1016 (39%), Positives = 608/1016 (59%), Gaps = 8/1016 (0%)

Query: 5    MKGINLSRWALTHQQMVGFLLVLAAVAGLFSYMALGRKEDPEFTVKTMMITVGWPGATAQ 64
            M G NLS  A+  + +  FL++L +V GL+++  LGR EDP FT+K M +   WPGATAQ
Sbjct: 1    MSGFNLSALAVRERSITLFLILLISVGGLYAFFKLGRAEDPAFTIKQMTVVTAWPGATAQ 60

Query: 65   QMSQQVIKPIETVLTENIAEIDYVKSKARPGQATLNVTLISTVKSSAVPDIWYRIRKTVT 124
            +M  QV++ +E  + E +   D  ++  RPG A   V L+ +   SAV + +Y+ RK + 
Sbjct: 61   EMQDQVVEKLEKRMQE-LRWYDRTETFTRPGLAFTTVYLLDSTPPSAVQEEFYQARKKIL 119

Query: 125  DNRADLPNGVVGPAFNDEFGTTYGNIYAVTGDGFSYPVLKRYAETLRDRIQALPDVAKTQ 184
            D +  LP+GV+GP  NDE+      +YA+   G    +L R AE+LR R+  +  V K  
Sbjct: 120  DEQKGLPSGVIGPMVNDEYSDVTFALYALKAKGEPQRLLVREAESLRQRLLHVAGVKKVN 179

Query: 185  IIGAQDEAIYVTYDSARLAMSGISAQAIADALDTTNAVAASGIVEAGAERVRMQVTGDFA 244
            IIG Q E I+V     RLA  GISA+ I  AL+T N +  +G VEA   +V +++ G F 
Sbjct: 180  IIGEQAERIFVELSYERLATLGISARDIFSALNTQNMITPAGSVEAKGPQVFIRLDGAFD 239

Query: 245  SVEAIAATPIVANGKSVRLDAIAKVERKPVHPATFRMRFGAKDAVGVGISLRSDGDVARL 304
             ++ I  TP+   G++++L  +A+V+R    PATF +R   + A+ +G+ +R   +   L
Sbjct: 240  DLQKIRNTPLTVQGRTLKLSDVAEVKRGYEDPATFLVRNNGEPALLLGVVMRDGWNGLDL 299

Query: 305  GEDLKHTIAALQSEMPVGVDIHTVSDQTRVVDESVGEFTTSLIEAIVIVLAVNFLSLGWR 364
            G+ L+    A+  +MP+G+ +  V+DQ   +  SV EF      A+ +VL V FLS+GWR
Sbjct: 300  GKSLEAEATAINEQMPLGMSLTKVTDQAVNIGASVNEFMVKFFAALGVVLLVCFLSMGWR 359

Query: 365  PGIVVALCIPLVLAMTFVCMLYVGIDLQRISLGALIIALGLLVDDAIIVVEAVATHLEAG 424
             G+VVA  +PL LA  F+ M   G D  RI+LG+LI+ALGLLVDDAII +E +   +E G
Sbjct: 360  VGVVVAAAVPLTLAAVFIVMAATGKDFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEG 419

Query: 425  WTRTRAAVSAYSVTAVPMLVGTLITVAGFLPIAMSKATASEYVISLFQVIAISLILSWVV 484
            + R +A+  A+S TA PML GTL+T  GF+P   +K+TA EY  ++F ++ I+LI SWVV
Sbjct: 420  YDRIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAKSTAGEYTANMFWIVGIALITSWVV 479

Query: 485  AVIFTPFIAYHLLPQRADARDDAGEPEEQYEGRFYGWFRRMLDRCLDRRKTVVAVALAMF 544
            AV+FTP++   LLPQ    +   G     Y    Y  FRR+L   + R+  V A  + +F
Sbjct: 480  AVVFTPYLGVKLLPQ---IKVPEGGHTAIYGTPNYQRFRRLLGSVIRRKGLVAASVVGLF 536

Query: 545  VGSMLLFQIGVPRQFFPASDRPELVVDLQLSQNASFAQTQAVAARMEQLLARDDRVVSTT 604
            V ++L   + V +QFFP SDRPE++V++Q+    S  QT   AA++E  LA        T
Sbjct: 537  VVAILGMGV-VKKQFFPTSDRPEVLVEVQMPYGTSIEQTDVAAAKVEAWLALQSEARIVT 595

Query: 605  AYLGGGSPRFYLPLNVQTPDITLAELVLQTRDEEAREGVIASIQSLFATHF-PEARGRVS 663
            AY+G G+PRFYL +  + PD + A++V+ T  ++ RE +   ++   A    PEAR RV+
Sbjct: 596  AYIGQGAPRFYLAMAPELPDPSFAKIVVLTTSQQEREALKLRLRQAVADGLAPEARVRVT 655

Query: 664  RLENGPSVGQPVQYRVAGPDLTQIMPVAKRLEELIRADSHARDVNSDLGEPLKAIRVDLD 723
            +L  GP    PV +RV G D   +  +A ++ E++ A    R VN+DLGE   A+ + LD
Sbjct: 656  QLVFGPYSPYPVAFRVMGADPAVLRDIAAQVREVMTASPMMRTVNTDLGERAPALHLTLD 715

Query: 724  QDKVRALGLSTQAVQQSLQAAIGGAGTTSFRDRDLALEVVLRLSAAERTDLGRIANLPIS 783
            QD+++A GL++  V Q LQ  + G   T  R+   +++VV R +   R D  +IA   ++
Sbjct: 716  QDRLQAFGLTSTDVAQQLQFLLTGVPVTEVREDIRSVQVVARSAGETRLDPSKIAAFTLT 775

Query: 784  TPNG-AVPLAQLGHVSAGSEPAVIYQRNRQPTITISADV-EGEQASDLTKRIEPQIEALR 841
               G  V L+Q+G V    E  ++ +R+R PTIT+  DV EG Q  D++  +  Q++ + 
Sbjct: 776  GAQGQRVSLSQVGAVDVRMEEPILRRRDRTPTITVRGDVAEGLQPPDVSNALITQLQPII 835

Query: 842  RDLPSGASIVKGGSEEQSSINQKATMAAVPFAIFVIVILLMLQLQNVKRMLVVLATGPLA 901
              LP+G  I   GS E+S    KA +   P  I ++++ +++Q++++  M++V AT PL 
Sbjct: 836  EKLPAGYRIEFAGSIEESGKANKALLPLFPIMIALMLLTIIIQVRSMSAMMMVFATAPLG 895

Query: 902  LIGVALIMALFRIPFGFVAMLGSLALFGMVLRNSVILIAQIDTLSGHGLAMREAVREAAV 961
            LIGV  I+ LF+ PFG  A++G +AL G+++RN++ILI QI +    GL+   AV EA V
Sbjct: 896  LIGVVPILLLFQQPFGINALVGLIALSGILMRNTLILIGQIHSNEQAGLSPYNAVVEATV 955

Query: 962  HRLRPILLTALAAILAMIPLTRSTFWGPMAWAIMGGLMVATILTLIVLPALYELVF 1017
             R RP++LTALAA+LA IPLT S FWG +A+ ++GG    T+LTL+ LPA+Y L F
Sbjct: 956  QRARPVILTALAAMLAFIPLTHSVFWGTLAYTLIGGTFAGTVLTLVFLPAMYALWF 1011