Pairwise Alignments

Query, 1031 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

 Score =  676 bits (1744), Expect = 0.0
 Identities = 386/1012 (38%), Positives = 592/1012 (58%), Gaps = 8/1012 (0%)

Query: 9    NLSRWALTHQQMVGFLLVLAAVAGLFSYMALGRKEDPEFTVKTMMITVGWPGATAQQMSQ 68
            NLS  A+  + +  F +VL A AG++++M+LGR EDP FT+KT+ +T  WPGATA++M  
Sbjct: 4    NLSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATAREMQD 63

Query: 69   QVIKPIETVLTENIAEIDYVKSKARPGQATLNVTLISTVKSSAVPDIWYRIRKTVTDNRA 128
             V +P+E  + E +   D V++  RPG A L VTL  +   +AV + +Y+ RK + D   
Sbjct: 64   LVAEPLEKRIQE-LTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDEAR 122

Query: 129  DLPNGVVGPAFNDEFGTTYGNIYAVTGDGFSYPVLKRYAETLRDRIQALPDVAKTQIIGA 188
            +LP+GV GP  NDE+      +YA+   G     L R AE +R  +  +P V K  I+G 
Sbjct: 123  NLPSGVFGPFVNDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINILGE 182

Query: 189  QDEAIYVTYDSARLAMSGISAQAIADALDTTNAVAASGIVEAGAERVRMQVTGDFASVEA 248
            + E I+V +  A+LA  GISAQ IA AL   N V  +G ++    +V ++  G + SV+A
Sbjct: 183  RPEQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSVQA 242

Query: 249  IAATPIVANGKSVRLDAIAKVERKPVHPATFRMRFGAKDAVGVGISLRSDGDVARLGEDL 308
            IAATPIVA G++++L   A+V R    PAT+ +R   + A+ +G  ++   +   LG+ L
Sbjct: 243  IAATPIVAAGRTLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGKAL 302

Query: 309  KHTIAALQSEMPVGVDIHTVSDQTRVVDESVGEFTTSLIEAIVIVLAVNFLSLGWRPGIV 368
            +   AA+   +P+G+ +  VSDQ   +D +VGEF      A+ +VL V+ LSLGWR GIV
Sbjct: 303  EERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGWRVGIV 362

Query: 369  VALCIPLVLAMTFVCMLYVGIDLQRISLGALIIALGLLVDDAIIVVEAVATHLEAGWTRT 428
            VAL +PL LA+ F+ ML  G    RI+LGALI+ALGLLVDDAII +E +   +E G  R 
Sbjct: 363  VALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMDRI 422

Query: 429  RAAVSAYSVTAVPMLVGTLITVAGFLPIAMSKATASEYVISLFQVIAISLILSWVVAVIF 488
            +AA  A+S TA PML GTL+T+ G +P+  +++TA EY  ++F V+  +LI+SWVVAVIF
Sbjct: 423  KAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAVIF 482

Query: 489  TPFIAYHLLPQRADARDDAGEPEEQYEGRFYGWFRRMLDRCLDRRKTVVAVALAMFVGSM 548
            TP++   +LP   D +   G     Y+   Y   R +++  + R K V    + + +   
Sbjct: 483  TPYLGVKMLP---DIKPVEGGHHAIYDTPNYRRLRGIIEFAV-RHKYVTCAVVGIVMALS 538

Query: 549  LLFQIGVPRQFFPASDRPELVVDLQLSQNASFAQTQAVAARMEQLLARDDRVVSTTAYLG 608
            ++   GV  QFFP SDRPE++V++++ + AS   T A   ++E+ L         T+Y+G
Sbjct: 539  VVGMGGVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADILTSYIG 598

Query: 609  GGSPRFYLPLNVQTPDITLAELVLQTRDEEAREGVIASIQSLFATHF-PEARGRVSRLEN 667
             G+PRF+  +  + PD   A++V+ T D  ARE +   +++  +    PE   RV++L  
Sbjct: 599  QGAPRFFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRVTQLVF 658

Query: 668  GPSVGQPVQYRVAGPDLTQIMPVAKRLEELIRADSHARDVNSDLGEPLKAIRVDLDQDKV 727
            GP    PV++R+ GPD  Q+  ++++  E+++     R  N D G     +R   DQD++
Sbjct: 659  GPYTPFPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVPDQDRL 718

Query: 728  RALGLSTQAVQQSLQAAIGGAGTTSFRDRDLALEVVLRLSAAERTDLGRIANLPISTPNG 787
              +GLS     Q +Q  + G   T  R+    + VV R +   R D  R+A+  + + +G
Sbjct: 719  NLIGLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSLMSRDG 778

Query: 788  -AVPLAQLGHVSAGSEPAVIYQRNRQPTITISADV-EGEQASDLTKRIEPQIEALRRDLP 845
              VPL Q+GH     E  ++ +R+R P ITI +D+ E  Q  +++++I   ++ L   LP
Sbjct: 779  RQVPLDQIGHSEIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPLIASLP 838

Query: 846  SGASIVKGGSEEQSSINQKATMAAVPFAIFVIVILLMLQLQNVKRMLVVLATGPLALIGV 905
             G  I  GG+ E+S     A +   P  I  ++I+++LQ++++  M +V+ T PL L GV
Sbjct: 839  VGYRIEMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAPLGLAGV 898

Query: 906  ALIMALFRIPFGFVAMLGSLALFGMVLRNSVILIAQIDTLSGHGLAMREAVREAAVHRLR 965
              ++ LF  PFGF A+LG + L G+++RN++IL  QI      GL    AV EA V R R
Sbjct: 899  VPVLLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAGLHDYHAVIEATVQRTR 958

Query: 966  PILLTALAAILAMIPLTRSTFWGPMAWAIMGGLMVATILTLIVLPALYELVF 1017
            P++LTALAA+LA +PLT S FWG MA+ ++GG  V T++ L+ LPALY   F
Sbjct: 959  PVILTALAAVLAFVPLTHSVFWGSMAYTLIGGTAVGTVMILLFLPALYAAWF 1010