Pairwise Alignments

Query, 1031 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1035 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  486 bits (1251), Expect = e-141
 Identities = 300/1029 (29%), Positives = 541/1029 (52%), Gaps = 23/1029 (2%)

Query: 8    INLSRWALTHQQMVGFLLVLAAVAGLFSYMALGRKEDPEFTVKTMMITVGWPGATAQQMS 67
            ++LS +AL  +  V F  VL+ +AG++SY  LG+ EDP FTVK+ +I   +PGA A+++ 
Sbjct: 1    MSLSTFALRQKTFVIFFTVLSIIAGIYSYFDLGKLEDPSFTVKSAVIVTLYPGANAKEVE 60

Query: 68   QQVIKPIETVLTENIAEIDYVKSKARPGQATLNVTLISTVKSSAVPDIWYRIRKTVTDNR 127
            Q V   IET L E +  +  ++S +RPG + + V L   V S A+P  W  +R+ V D +
Sbjct: 61   QLVTDKIETKL-EEMESLWKLRSLSRPGSSMIFVDLKEKVNSEALPQQWDLMRRKVEDVK 119

Query: 128  ADLPNGVVGPAFNDEFGTTYGNIYAVTGDGFSYPVLKRYAETLRDRIQALPDVAKTQIIG 187
             +LP         DEF   YG ++AV GD      LK +A  L+ RI+A+  V K Q+ G
Sbjct: 120  LELPVQAQISIVQDEFSEVYGMLFAVYGDNMEMAELKDHARELQRRIKAVDGVKKVQLHG 179

Query: 188  AQDEAIYVTYDSARLAMSGISAQAIADALDTTNAVAASGIVEAGAERVRMQVTGDFASVE 247
              ++ + +     RLA + ++   + + L + N    +G  + G E +R++    F S+E
Sbjct: 180  INEQVVNIRISEERLAEANLTMLQLIEQLHSQNMPIVAGDFDLGIENLRVEQGDTFKSIE 239

Query: 248  AIAATPIVA--NGKS---VRLDAIAKVERKPVHPATFRMRFGAKDAVGVGISLRSDGDVA 302
             I    I    NG     +RL  IA V      PA+   R+  + A+ + +S  +  +V 
Sbjct: 240  DIRNLSIQTGLNGLQSAVIRLGDIADVTMAYQDPASTLSRYNGQQAITLAVSPVNGINVV 299

Query: 303  RLGEDLKHTIAALQSEMPVGVDIHTVSDQTRVVDESVGEFTTSLIEAIVIVLAVNFLSLG 362
             +G+ LK  +A  Q+++P G  I  ++ Q   V +SV  F  +LIE++VIV+ V  + +G
Sbjct: 300  SIGDTLKAVLADYQAKLPDGAGIGVIAYQPEEVQKSVNNFIVNLIESVVIVVVVLLIFMG 359

Query: 363  WRPGIVVALCIPLVLAMTFVCMLYVGIDLQRISLGALIIALGLLVDDAIIVVEAVATHLE 422
            WR   +V + + L +  T + M    +DLQR+SLG+ ++ALG+LVD+AI++V+     ++
Sbjct: 360  WRSAAIVGVSLLLTILFTLIYMNLTSVDLQRVSLGSFVLALGMLVDNAIVIVDLFQAKIK 419

Query: 423  AGWTRTRAAVSAYSVTAVPMLVGTLITVAGFLPIAMSKATASEYVISLFQVIAISLILSW 482
             G  RT+A + +    A+P+L  T+I   G  P+ +S+  ++E+ +S+ QV+  SL+LSW
Sbjct: 420  QGIERTQAVIDSIKEMAMPLLGATVIAAMGTAPVLLSQTDSAEFSLSIVQVLCSSLLLSW 479

Query: 483  VVAVIFTPFIAYHLLPQRADARDDAGEPEEQYEGRFYGWFRRMLDRCLDRRKTVVAVALA 542
            ++A++ TP + ++ L + ++   +  +P  +Y       +++ ++  ++  K  +   + 
Sbjct: 480  IIAMVVTPLMCWYFLGKTSEVDAENAKPPSRYT----LMYQQAVEWVVENPKKTILFTVP 535

Query: 543  MFVGSMLLFQIGVPRQFFPASDRPELVVDLQLSQNASFAQTQAVAARMEQLLARDDRVVS 602
            + +G++L+  + +   F P+SDR  + +D  L       QT     ++E  L     V S
Sbjct: 536  LLLGTLLVAPL-LKVNFMPSSDRAIVFLDYWLPNGGRIEQTSTDMRKVEHWLLAQPEVAS 594

Query: 603  TTAYLGGGSPRFYLPLNVQTPDITLAELVLQTRDEEAREGVIASIQSLFATHFPEARGRV 662
             ++Y+G  +PRF + +  +  D +  ++++  R  +  + ++    +  A  FP A  R 
Sbjct: 595  ISSYVGESAPRFSVTVEPEPLDASYGQILINMRSFDDIDTLVQRGDAWLAKEFPYAEPRF 654

Query: 663  SRLENGPSVGQPVQYRVAGPDLTQIMPVAKRLEELIRADSHARDVNSDLGEPLKAIRVDL 722
              L+        ++ R  G D   +  +A + ++++R   + + V  D  +  K +   +
Sbjct: 655  RELKLATKDKYSIEARFIGQDPKVLHSLANQAKDIMRQHPNLKYVRDDWRQESKVMTPQV 714

Query: 723  DQDKVRALGLSTQAVQQSLQAAIGGAGTTSFRDRDLALEVVLRLSAAERTDLGRIANLPI 782
            D    R  G++   +  ++     G    + R  D  + + LR + A    L    ++P+
Sbjct: 715  DMHAARLAGVTRTDIANAINRVTEGTHVGTMRHGDDLIPIKLRSADA---SLEHFEHIPV 771

Query: 783  STPNG--AVPLAQ-LGHVSAGSEPAVIYQRNRQPTITISADVEGEQASDLTKRIEPQIEA 839
             +  G  +VP+ Q +  +    E +++++RNR P IT  A V G+ AS++ + I   IEA
Sbjct: 772  RSLLGTHSVPMGQVVESIEIKGEESMVWRRNRLPAITAQAGVSGDTASNVRQSIAADIEA 831

Query: 840  LRRDLPSGASIVKGGS--EEQSSINQKATMAAVPFAIFVIVILLMLQLQNVKRMLVVLAT 897
            +   LP G  +  GG   +EQ SI+    M   P A  ++VI+L+      ++ L+++ T
Sbjct: 832  IA--LPDGYRMEWGGEYYDEQRSIDD--LMQQNPKATLLMVIILVAMFNAFRQPLIIMIT 887

Query: 898  GPLALIGVALIMALFRIPFGFVAMLGSLALFGMVLRNSVILIAQIDTLSGHGLAMREAVR 957
             PLA IG+   + L   PFGF+A++G + L GM+++N ++L+ QI+    +G  + EA++
Sbjct: 888  LPLAAIGIVWSLLLLDKPFGFMAIVGMICLSGMIIKNGIVLMDQIELERRNGRRIAEAIK 947

Query: 958  EAAVHRLRPILLTALAAILAMIPLTRSTFWGPMAWAIMGGLMVATILTLIVLPALYELVF 1017
             A ++R   I + AL   L MIPL     +  MA  I+GGL  A++L+L V+PALY L +
Sbjct: 948  AATLNRTMAISMAALTTALGMIPLLTDRLFDQMAATIIGGLTAASVLSLFVMPALYRLFY 1007

Query: 1018 DRPQHRADS 1026
             R +   D+
Sbjct: 1008 RREEREEDA 1016