Pairwise Alignments

Query, 1031 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1026 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  364 bits (934), Expect = e-104
 Identities = 263/1012 (25%), Positives = 476/1012 (47%), Gaps = 27/1012 (2%)

Query: 19   QMVGFLLVLAAVAGLFSYMALGRKEDPEFTVKTMMITVGWPGATAQQMSQQVIKPIETVL 78
            ++V  ++ L  VAG  +  +L R EDP  T +   +   +PGA+A+++   V + +E  L
Sbjct: 10   RLVSLVIALLLVAGFGAMSSLPRTEDPHITNRFASVITPYPGASAERVEALVTEVLENQL 69

Query: 79   TENIAEIDYVKSKARPGQATLNVTLISTVKSSAVPDIWYRIRKTVTDNRADLPNGVVGPA 138
               + EI  ++S +RPG + + + L  TV  +    +W R R  + D R  LP+G+  P 
Sbjct: 70   -RRLEEIKLIQSTSRPGISVIQLELKDTVTDT--DPVWSRARDLLADARNTLPDGIQTPT 126

Query: 139  FNDEFGTTYGNIYAVTGDGFSYP---VLKRYAETLRDRIQALPDVAKTQIIGAQDEAIYV 195
             +D+ G  Y  I ++  +  S P   +L RYA+ L+ R++ L      ++ GA +E I V
Sbjct: 127  LDDQVGYAYTAILSLVWNDSSQPRVDMLNRYAKELQSRLRLLSGTDFVKLYGAPEEEILV 186

Query: 196  TYDSARLAMSGISAQAIADALDTTNAVAASGIVEAGAERVRMQVTGDFASVEAIAATPIV 255
              D  +++   ++   IA  L + ++  A+G +     R  ++V+G+  S   I   P+ 
Sbjct: 187  QLDGYKMSQLQLTPGTIAKILSSADSKIAAGEINNNHFRALVEVSGELDSQSRIRQVPLK 246

Query: 256  --ANGKSVRLDAIAKVERKPVHPATFRMRFGAKDAVGVGISLRSDGDVARLGEDLKHTIA 313
              A G+ +RL  IA + R+P  PA        +  V V   + ++  V      +K  + 
Sbjct: 247  VDAQGQIIRLGDIAHISRQPKTPADSIALVDGEQGVFVAARMLNNTRVDIWQGQVKQLVD 306

Query: 314  ALQSEMPVGVDIHTVSDQTRVVDESVGEFTTSLIEAIVIVLAVNFLSLGWRPGIVVALCI 373
                E+P  + +  + +Q     E +G    +L++  VI+LAV  L+LG R  I+VAL +
Sbjct: 307  EFNQELPANIKVQWLFEQNSYTSERLGGLIVNLLQGFVIILAVLLLTLGLRNAIIVALSL 366

Query: 374  PLVLAMTFVCMLYVGIDLQRISLGALIIALGLLVDDAIIVVEAVATHLEAGWTRTRAAVS 433
            PL    T  CM Y+G+ + ++S+  L++ALG++VD+AI++V+A+A   + G +R  A   
Sbjct: 367  PLTALFTLACMKYIGLPIHQMSVTGLVVALGIMVDNAIVIVDAIAQRRQQGMSRLSAVSE 426

Query: 434  AYSVTAVPMLVGTLITVAGFLPIAMSKATASEYVISLFQVIAISLILSWVVA-VIFTPFI 492
                  +P+   T+ T+  F PI +    A E+V  +   +  +L+ S+V++  +     
Sbjct: 427  TLHHLWLPLAGSTITTILAFAPIVLMPGAAGEFVGGIAMSVMFALLGSYVISHTLIAGLA 486

Query: 493  AYHLLPQRADARDDAGEPEEQYEGRFYGWFRRMLDRCLDRRKTVVAVALAMFVGSMLLFQ 552
                L  +       G       G F    R  L+R L     +  + L  F  S  + +
Sbjct: 487  GRFSLEGKHPVWYQHGINVPLVSGYFQASLRFALNRPLLSATFIGIIPLLGFYASGKMTE 546

Query: 553  IGVPRQFFPASDRPELVVDLQLSQNASFAQTQAVAARMEQLLARDDRVVSTTAYLGGGSP 612
                 QFFP SDR    ++L L+ + S   T      M++ L + + ++     +GG +P
Sbjct: 547  -----QFFPPSDRDMFQIELYLAPHVSLENTLNQVQLMDKQLHQIEGIIQVDWVVGGNTP 601

Query: 613  RFYLPLNVQTPDIT-LAELVLQTRDEEAREGVIASIQSLFATHFPEARGRVSRLENGPSV 671
             FY  L  +    T  A+ +++  D E    +I  +Q      FPEA+  V +LE GP  
Sbjct: 602  SFYYNLTQRQQGATNYAQAMVKASDFERANALIPELQQTLDKAFPEAQVLVRKLEQGPPF 661

Query: 672  GQPVQYRVAGPDLTQIMPVAKRLEELIRADSHARDVNSDLGEPLKAIRVDLDQDKVRALG 731
              PV+  + GP+L  +  +   +  ++ A        + L      + + +++D     G
Sbjct: 662  NAPVELMIFGPNLETLRSLGDEVRNILAATPDVLHTRATLSAGAPKVWLQVNEDASLISG 721

Query: 732  LSTQAVQQSLQAAIGGAGTTSFRDRDLALEVVLRLSAAERTDLGRIANLPISTPNG-AVP 790
            L+   + + +Q A  G    S  ++  +L + +RL    R    R++ + + TP+G AVP
Sbjct: 722  LTLTDIARQVQMATTGVIGGSVLEQTESLPIRVRLGDTSREQASRLSEIQLVTPSGTAVP 781

Query: 791  LAQLGHVSAGSEPAVIYQRNRQPTITISA-DVEGEQASDLTKRIEPQIEALRRDLPSGAS 849
            L+ L H         I +RN Q   TI A  V G   + +   ++ ++ A+   LP+G  
Sbjct: 782  LSALSHNEVQVSRGAIPRRNGQRVNTIEAYIVSGVLPAQVLNDVKAKVAAI--SLPAGYR 839

Query: 850  IVKGGSEEQSSINQKATMAAVPFAIFVIVILL--MLQLQNVKRMLVVLATGPLALIGVAL 907
            I  GG   +S+   +A    +   I V+ +LL  ++   N  R+  ++    L   G+ L
Sbjct: 840  IEIGG---ESAKRNEAVGNLLSNLILVVTLLLATVVLSFNSFRLTAIILLSALQSAGLGL 896

Query: 908  I-MALFRIPFGFVAMLGSLALFGMVLRNSVILIAQIDTLSGHGLAMREAVREAAVHRLRP 966
            + + +F  PFGF  ++  L L G+ +  +++++A+++         +E +        R 
Sbjct: 897  LAVYVFGYPFGFPVIIALLGLMGLAINAAIVILAELEDTDNARAGDKEVIITTVSSCGRH 956

Query: 967  ILLTALAAILAMIPL--TRSTFWGPMAWAIMGGLMVATILTLIVLPALYELV 1016
            I  T +  +   IPL      FW P A AI GG ++ T+L+L+ +P +Y L+
Sbjct: 957  ISSTTITTVGGFIPLIIAGGGFWPPFAIAIAGGTLLTTLLSLVWVPTMYLLL 1008