Pairwise Alignments

Query, 618 a.a., Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) from Sphingobium sp. HT1-2

Subject, 392 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

 Score =  145 bits (366), Expect = 3e-39
 Identities = 84/201 (41%), Positives = 119/201 (59%), Gaps = 16/201 (7%)

Query: 43  MASNKGALTRGVTNNTLDGFSFERVE--------NLIARISAGDYRFTPVRRVYIPKANG 94
           M +NKGA          DG S E            +  R+ AG YR  PVRRV IPK +G
Sbjct: 1   MKANKGAAGA-------DGLSIEATAAHLRTAWPGIRERVLAGTYRPMPVRRVTIPKPDG 53

Query: 95  KKRPLGVPTADDKLVQGVVKLLLEVVYEPVFSVHSHGFRRGRSCHTALDKIKN-GWTGVK 153
            +R LG+PT  D+L+Q  +  +L+ + +P FS HSHGFR GRS H A+   ++   +G +
Sbjct: 54  GERELGIPTVTDRLIQQALLQVLQPLLDPAFSEHSHGFRPGRSAHGAVLAAQSLVQSGRR 113

Query: 154 WFVDVDVVGFFDNIDHRILLNLLKKRIDDKRFIKVVEGMLKAGYMEEWKFHATMSGTPQG 213
             VDVD+  FFD ++H IL++ L KRI DKR I+++   L +G M+       + GTPQG
Sbjct: 114 IVVDVDLEKFFDRVNHDILIDRLSKRISDKRVIRLIRAYLNSGIMDHGVVQERVMGTPQG 173

Query: 214 GIVSPILANIYLHELDEFLEQ 234
           G +SP+LAN+ L E+D+ LE+
Sbjct: 174 GPLSPLLANVLLDEVDKELER 194