Pairwise Alignments

Query, 618 a.a., Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) from Sphingobium sp. HT1-2

Subject, 453 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

 Score =  149 bits (375), Expect = 3e-40
 Identities = 87/219 (39%), Positives = 127/219 (57%), Gaps = 16/219 (7%)

Query: 25  GLSRLMQSRILWEKAYAEMASNKGALTRGVTNNTLDGFSFERVE--------NLIARISA 76
           GL     +R   ++A+  + +NKGA          DG S E           ++  R+ A
Sbjct: 44  GLLEAALARENLQRAWKRVKANKGAAGA-------DGLSIEATAAHLRTSWPDIRERVLA 96

Query: 77  GDYRFTPVRRVYIPKANGKKRPLGVPTADDKLVQGVVKLLLEVVYEPVFSVHSHGFRRGR 136
           G YR  PVRRV IPK +G +R LG+PT  D+L+Q  +  +L+ + +P FS HSHGFR GR
Sbjct: 97  GTYRPMPVRRVTIPKPDGGERELGIPTVTDRLIQQALLQVLQPLLDPAFSEHSHGFRPGR 156

Query: 137 SCHTA-LDKIKNGWTGVKWFVDVDVVGFFDNIDHRILLNLLKKRIDDKRFIKVVEGMLKA 195
           S H A L+      +G +  VDVD+  FFD ++H IL++ L KRI D+R I+++   L +
Sbjct: 157 SAHDAVLEAQSYVQSGRRIVVDVDLEKFFDRVNHDILIDRLSKRISDRRVIRLIRAYLNS 216

Query: 196 GYMEEWKFHATMSGTPQGGIVSPILANIYLHELDEFLEQ 234
           G M+       + GTPQGG +SP+LAN+ L E+D+ LE+
Sbjct: 217 GIMDHGVVQERVMGTPQGGPLSPLLANVLLDEVDKELER 255