Pairwise Alignments

Query, 305 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 243 a.a., lytic transglycosylase, catalytic (RefSeq) from Shewanella loihica PV-4

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 61/146 (41%), Positives = 79/146 (54%), Gaps = 9/146 (6%)

Query: 118 MYSPAACSITPYRPRGDLAPWQEAR--RARYFPMISAVACEAGVPTGLLDALVAQESQYD 175
           +Y   AC     +P  DL  WQ+     A Y  +IS  A   G+   L+ A++  ES ++
Sbjct: 93  LYECYAC-----KPDSDL-DWQKMPLFSAEYDELISRAAKTHGLDPALIRAVIHAESAFN 146

Query: 176 PLVVSPKGAVGLTQLMPGTARGLGVYNSRDPLANLRGGARYLRSHLDEFK-RVDLALAAY 234
              +S  GA+GL QLMPGTA+ +GV N   P  N+ GGARYL   L  F   +DLA AAY
Sbjct: 147 VFALSRSGAMGLMQLMPGTAKAMGVKNPYRPEQNIDGGARYLAKMLARFDGNIDLACAAY 206

Query: 235 NAGPGRVRMLGRIPPFRETIDYVAAI 260
           NAGP  V     IPP+ ET  YV  +
Sbjct: 207 NAGPTTVTQYKGIPPYPETQAYVKRV 232