Pairwise Alignments

Query, 544 a.a., Metallo-beta-lactamase family protein, RNA-specific from Sphingobium sp. HT1-2

Subject, 635 a.a., beta-CASP ribonuclease aCPSF1 from Methanococcus maripaludis S2

 Score =  162 bits (411), Expect = 3e-44
 Identities = 121/438 (27%), Positives = 207/438 (47%), Gaps = 35/438 (7%)

Query: 9   FHGAAGTVTGSCMELALGARSILVDCGLFQGSRSLEAL-NLGSFGFDPRRIDAVILTHAH 67
           F G +  V  +C+        ILVDCG+       +A  +  +  F    IDAV++THAH
Sbjct: 184 FLGGSREVGRTCLYHQTPESRILVDCGINIAVEDEKAFPHFDAPEFSIEEIDAVVVTHAH 243

Query: 68  IDHCGLLPKLAAQGYEGAIWCTQATSDLLEFMLADAGRIQEYEAERRNRRRDRAGDALFE 127
           +DHCG +P L   GY+G ++CT+ T DL+  +  D   I E E +               
Sbjct: 244 LDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGK--------------N 289

Query: 128 PLYTEEDAISAWRLSRPVALGNWFEPAPGFKARLWNAGHILGSASVELYAGGA--HILLS 185
             Y+ +D  +  + + P+  G   + AP  K  + NAGHILGSA    + G    ++  +
Sbjct: 290 VPYSSKDIKNCIKHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDGLYNVAYT 349

Query: 186 GDLGPDNKAFHADPAAPK--GLDHVVCESTYGNRAREKLTIDERRAQLEGVVKEAIARGG 243
           GD+  +      +PA  +   L+ ++ ESTYG         DE   +   V+ E IAR G
Sbjct: 350 GDIKFEASRL-LEPAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFLRVIAETIARKG 408

Query: 244 NLVIPSFALERTQELLLDLARLSDANRIPNVPIFVDPPLASRAIKVFSSHIDEMEDVDGR 303
             +IP F + R QEL+L L    +   I N P+++D  +   A  + +++ + +      
Sbjct: 409 KAIIPVFGIGRAQELMLVLEEGYNQG-IFNAPVYLD-GMIWEATAIHTAYPEYLSKNMRN 466

Query: 304 DIFRHPSIRYVEDSLESMR--------LNTVSGAIILAASGMCEAGRIRHHLKHNLFRRE 355
            IF      ++ +  + ++        +++    IIL  SGM   G    + K+     +
Sbjct: 467 RIFHEGDNPFLSEVFKKVKNTNDRRNIMDSDEPGIILTTSGMLSGGPSVEYFKNLADDEK 526

Query: 356 STVLFVGFQAEGTLGRVILDGAQRVRISGED-----VNVRAQIRRIDSYSAHADRDELHD 410
           ++++FVG+Q+EGTLGR I  G + + + G++     V V   +  ++ +S H+DR +L  
Sbjct: 527 NSIVFVGYQSEGTLGRKIQKGFKEIPLMGKNGRSKAVKVNLSVHTLEGFSGHSDRKQLIK 586

Query: 411 WIRDRGKLGGSLFLSHGE 428
           ++R    +   +   HGE
Sbjct: 587 YLRKLKPIPDRILTVHGE 604