Pairwise Alignments

Query, 544 a.a., Metallo-beta-lactamase family protein, RNA-specific from Sphingobium sp. HT1-2

Subject, 478 a.a., metallo-beta-lactamase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  279 bits (714), Expect = 1e-79
 Identities = 183/474 (38%), Positives = 263/474 (55%), Gaps = 21/474 (4%)

Query: 5   LTMKFHGAAGTVTGSCMELALGARSILVDCGLFQGSRSLEALNLGSFGFDPRRIDAVILT 64
           +T++F GAA  VTGSC  + +  + +L+DCGL QG ++ E  N   F FDP+ I AV+L+
Sbjct: 1   MTLQFLGAAREVTGSCHLVTVAGKHLLLDCGLIQGGKADELRNHEPFVFDPQTIVAVVLS 60

Query: 65  HAHIDHCGLLPKLAAQGYEGAIWCTQATSDLLEFMLADAGRIQEYEAERRNRRRDRAGDA 124
           HAHIDH G LP L   G++G I+  +AT++L   ML DA  +Q  + ER N++R +   A
Sbjct: 61  HAHIDHSGRLPLLVKAGFDGPIYTHKATAELCAIMLKDAAMLQVRDTERTNKKRAKHDLA 120

Query: 125 LFEPLYTEEDAISAWRLSRPVALGNWFEPAPGFKARLWNAGHILGSASVELYAGGA---- 180
             EPL+T EDA  A      +  G      P     L +AGHILGSA VEL+ G      
Sbjct: 121 PLEPLFTVEDAEQAISQFVSLEYGQVTRVIPHVDICLSDAGHILGSALVELWLGEGKSQK 180

Query: 181 HILLSGDLGPDNKAFHADPAAPKGLDHVVCESTYGNRAREKLTIDERRAQLEGVVKEAIA 240
            I+ SGDLG        +P      D V+ ESTYGNR     T  +  A+L+ +  + + 
Sbjct: 181 KIVFSGDLGRAGMPILQNPTLVDTADLVLMESTYGNRFHRSWT--DTLAELKDIFAKTVN 238

Query: 241 RG-GNLVIPSFALERTQELLLDLARLSDANRIPNVPIFVDPPLASRAIKVFSSHIDEMED 299
              GN+++P+F++ R QELL      +    +    I +D P+A  A +V+ ++   M++
Sbjct: 239 ESQGNILLPAFSVGRAQELLYLFHLYAKEWDLGRWKICLDSPMAIEATRVYVNNYPLMDE 298

Query: 300 VDGRDIFRHP-------SIRYVEDSLESMRLNTV-SGAIILAASGMCEAGRIRHHLKHNL 351
              R   +HP       ++ +++ + ES+ LN V  G II+A SGMC  GRIR HL+HNL
Sbjct: 299 DFKRFTRQHPGQHPLLSNVEFIQTTEESIALNEVHKGLIIIAGSGMCNGGRIRSHLEHNL 358

Query: 352 FRRESTVLFVGFQAEGTLGRVILDGAQRVRISGEDVNVRAQIRRIDSYSAHADRDELHDW 411
           +R E  V+  GFQA GT GR ++DGA+ + I G  VNV A++  +   SAHAD+ EL  W
Sbjct: 359 WRSECDVIICGFQALGTPGRALVDGAKELTIHGNSVNVAAKLHTVGGLSAHADQAELLRW 418

Query: 412 IRDRGKLGGSLFLSHGEGQAVEGLRALVQGD---DPAASVIAPQ--MGERFALP 460
            R   +    L L HGE +A +GL A++  D    P A  IA +  M +  ALP
Sbjct: 419 YR-HFEEQPPLVLVHGEPEAQQGLVAVMNQDPKTKPKALAIATRGDMLDLTALP 471