Pairwise Alignments

Query, 172 a.a., Mobile element protein from Sphingobium sp. HT1-2

Subject, 269 a.a., ISSod1, transposase OrfB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 40.0 bits (92), Expect = 3e-08
 Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 14/144 (9%)

Query: 1   MYLSTVLDDFSRYIIAWKLCTNMRAEDVTDTLDLALAASGCDSATVLHKPRLLSDNGPSY 60
           MYL+ V+D +SR I+ W++   M  + ++  L  A          V H     SD G  Y
Sbjct: 123 MYLAVVMDLYSRRIVGWRIDKRMTTDLISKALIKAYNLRQPARGLVFH-----SDRGSQY 177

Query: 61  IAGELAEYIEARKMSHVRGAPCHPQTQGKIERWHQTLKNRILLE-----NYFLPGDLEAH 115
            + +    + +  +    G          +ER+  +LK+  + +       F+  D    
Sbjct: 178 TSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVAQPTREFMKQD---- 233

Query: 116 IEAFVEHYNHQRYHESLANVTPAD 139
           + A++++YN +R H +  +++P +
Sbjct: 234 VTAYIKYYNLERLHSANNDLSPVE 257