Pairwise Alignments

Query, 326 a.a., Mobile element protein from Sphingobium sp. HT1-2

Subject, 269 a.a., ISSod1, transposase OrfB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 15/162 (9%)

Query: 137 NEMWQTDFTYFKIIGWGWMYLSTVLDDFSRYIIAWKLCTNMRAEDVTDTLDLALAASGCD 196
           N++W  D TY K  G GWMYL+ V+D +SR I+ W++   M  + ++  L  A       
Sbjct: 106 NQVWAGDVTYLKT-GEGWMYLAVVMDLYSRRIVGWRIDKRMTTDLISKALIKAYNLRQPA 164

Query: 197 SATVLHKPRLLSDNGPSYIAGELAEYIEARKMSHVRGAPCHPQTQGKIERWHQTLKNRIL 256
              V H     SD G  Y + +    + +  +    G          +ER+  +LK+  +
Sbjct: 165 RGLVFH-----SDRGSQYTSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWI 219

Query: 257 LE-----NYFLPGDLEAHIEAFVEHYNHQRYHESLANVTPAD 293
            +       F+  D    + A++++YN +R H +  +++P +
Sbjct: 220 FKVAQPTREFMKQD----VTAYIKYYNLERLHSANNDLSPVE 257