Pairwise Alignments

Query, 1023 a.a., IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI from Sphingobium sp. HT1-2

Subject, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score = 43.5 bits (101), Expect = 5e-08
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 9/128 (7%)

Query: 791 DAMQLAQREQIRLHEGDKIRWTKNDRDRGLNNNDIA---RVISADKAGIRV--EASDGTI 845
           +A +L + ++   + G  I  T+ND   GL N DI    R    D+  ++V  E  DG+I
Sbjct: 560 NAHKLIKTQEEIWYHGRPIMVTRNDHGLGLYNGDIGLCMRDRDDDQGRLKVYFELPDGSI 619

Query: 846 HD-LKAGDPMMERISLAYALNMHAAQGITTDTAIAVMSHKESNLSNQRLFNVTVTRVRDD 904
              L +  P  E    AYA+ +H +QG   D  + ++    S +  + L    +TR +  
Sbjct: 620 KAVLPSRVPQHET---AYAMTIHKSQGSEFDLTLLILPPDYSPILTRELVYTGITRAKKQ 676

Query: 905 IQLFTDDR 912
           ++L+ D++
Sbjct: 677 LKLYCDNK 684



 Score = 36.6 bits (83), Expect = 6e-06
 Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 26/162 (16%)

Query: 466 QMAAATMALISRDRIVAVQGVSGAGKST-----MLASVARNVEQEGGKVVGLALMKATAD 520
           Q  AA +AL  R  +++  G  G GK+T     + A +++++ Q  GKV  + L+  T  
Sbjct: 237 QKVAAAVALTRRFAVIS--GGPGTGKTTTVTKLLAALISQSMAQ--GKVPEIKLIAPTGK 292

Query: 521 RLGAETGIESRTVSSFV-----------HSYARHALAGKGAGY----DGARDALAGTTII 565
                T    + VS               S   H L G   G        R+ L    ++
Sbjct: 293 AAARLTESMGKAVSQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLV 352

Query: 566 LDEASMVGSEQMKHLVGIANALGVDRFLMIGDRQQITAVDAG 607
           +DEASMV    M  LV         R +++GD+ Q+ +V+AG
Sbjct: 353 VDEASMVDLPLMVKLVEALPKHA--RLILLGDKDQLASVEAG 392