Pairwise Alignments

Query, 1023 a.a., IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI from Sphingobium sp. HT1-2

Subject, 1539 a.a., conjugal transfer protein from Sinorhizobium meliloti 1021

 Score = 87.0 bits (214), Expect = 9e-21
 Identities = 125/543 (23%), Positives = 203/543 (37%), Gaps = 111/543 (20%)

Query: 394 SELIRNEQLIPGKSDRIDDFVTHVTTPEALATERGILAE---------IERGKGEGRVIV 444
           + L+ +++L+  K  +ID        P    T   +  E         + R KG G    
Sbjct: 312 ARLMASDELVLLKPQQIDAETGKAKQPAVFTTREMLRLEYAMAQSAEVLSRRKGFGVSNA 371

Query: 445 PADVVIDRINAASGDKQLNEGQMAAATMALISRDR-IVAVQGVSGAGKSTMLASVARNVE 503
            A   +  I  A  +K           +  ++RD  I AV G++GAGKST+LA+     E
Sbjct: 372 RAAAAVRSIETADTEKPFRLDLEQVDAVRHVTRDNAIAAVVGLAGAGKSTLLAAARAAWE 431

Query: 504 QEGGKVVGLALMKATADRLGAETGIESRTVSSFVHSYARHALAGKGAGYDGARDALAGTT 563
            EG +V+G AL    A+ L   +GI SRT++S+           + A   G      G  
Sbjct: 432 GEGRRVIGAALAGKAAEGLEDSSGIRSRTLASW-----------ELAWESGREQLQRGDV 480

Query: 564 IILDEASMVGSEQMKHLVGIANALGVDRFLMIGDRQQITAVDAGKAFAIAQAGGITLARM 623
           +++DEA MV S+QM  ++      G  + +++GD  Q+  ++AG AF  A +  I  A +
Sbjct: 481 LVIDEAGMVSSQQMARVLKAVEDAGA-KAVLVGDAMQLQPIEAGAAFR-AISERIGFAEL 538

Query: 624 DENLRQRTDQLRTVAALTNLGQVREAMAVLGDKVTANPEHVKAAAEHWLGLTPEQRETTA 683
               RQR    R  + L   G+V E +                                A
Sbjct: 539 AGVRRQRDAWARDASRLFARGKVEEGL-------------------------------DA 567

Query: 684 MFSSGRVARAELNVRIQDGLAAEGAIKGEGVAIGVLDKINITR----EELRYAHSYKPGQ 739
               GR+   E    I D + A+ A     +     D  +  R    E L  AH+     
Sbjct: 568 YAQQGRIVETETRAEIVDRIVADWANARRDLLQKSADGEHPGRLRGDELLVLAHT--NDD 625

Query: 740 VLDIPKAVRDLGLGPGTYDVIGVDHKGRVQVRIGSRVRSFDPQRISPLDKSDAMQLAQRE 799
           V  + +A+R++ +G G          G  + +    +R F                    
Sbjct: 626 VRKLNEALRNVMIGEGAL-------TGAREFQTARGLREF-------------------- 658

Query: 800 QIRLHEGDKIRWTKNDR----------DRGLNNNDIARVIS-ADKAG---IRVEASDGTI 845
                 GD+I + +N R           + + N  +  V+S  D+ G   + V    G  
Sbjct: 659 ----AAGDRIIFLENARFVEPRARRLGPQYVKNGMLGTVVSTGDRRGDTLLSVRLDSG-- 712

Query: 846 HDLKAGDPMMERISLAYALNMHAAQGITTDTAIAVMSHKESNLSNQRLFNVTVTRVRDDI 905
            D+         +   YA  +H +QG T D    +     + + +Q L  V +TR RD  
Sbjct: 713 RDVVISQDSYRNVDHGYAATIHKSQGSTVDRTFVL----ATGMMDQHLTYVAMTRHRDRA 768

Query: 906 QLF 908
            L+
Sbjct: 769 DLY 771