Pairwise Alignments

Query, 1023 a.a., IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI from Sphingobium sp. HT1-2

Subject, 606 a.a., RecBCD enzyme subunit RecD from Enterobacter sp. TBS_079

 Score = 59.7 bits (143), Expect = 6e-13
 Identities = 109/509 (21%), Positives = 193/509 (37%), Gaps = 86/509 (16%)

Query: 461 QLNEGQMAAATMALISRDRIVAVQGVSGAGKSTMLASVARNVEQEGGKV---------VG 511
           +  + Q  AA +AL  R  I  + G  G GK+T +A +   + Q  G+           G
Sbjct: 148 EATDWQKVAAAVALTRR--ISVISGGPGTGKTTTVAKLLAALIQLSGEQKCRIRLAAPTG 205

Query: 512 LALMKATADRLGA--ETGIESRTVSSFVHSYAR-HALAGKGAGYDGAR----DALAGTTI 564
            A  + T    GA  +  +    ++ F +  +  H L G   G    R    + L    +
Sbjct: 206 KAAARLTESLGGALQKLPLTGEQLALFPNDASTLHRLLGAQPGSQRLRYHAGNPLHLDVL 265

Query: 565 ILDEASMVGSEQMKHLVGIANALGVDRFLMIGDRQQITAVDAGKAFAIAQAGGITLARMD 624
           ++DEASM+    M  L+    A    R + +GDR Q+ +V+AG     A  G I      
Sbjct: 266 VVDEASMIDLTMMARLIDALPAHA--RVIFLGDRDQLASVEAG-----AVLGDICTYASL 318

Query: 625 ENLRQRTDQLRTVAALTNLGQVREAMAVLGDKVTANPEHVKAAAEHWLG-----LTPEQR 679
               +R ++L  +   +   +       L D +    +  +  ++  +G     +    R
Sbjct: 319 GYTAERAEELSRLTGCSLASENHSLAGALRDSLCLLQKSYRFGSDSGIGQLASAVNRGDR 378

Query: 680 ETTAMFSSGR---VARAELNVRIQDGLAAEGAIKG-EGVAIGVLDKINITREELRYAHSY 735
            TT     G+   + +  L    +     + A++G +    GV  +              
Sbjct: 379 HTTCAVFDGQFTDIEKKSLQTGEEYQAMLDDALQGYQHFLTGVQQQCT------------ 426

Query: 736 KPGQVLDIPKAVRDLGLGPGTYDVIGVDHKGRVQVRIGSRVRSFDPQRISPLDKSDAMQL 795
            P Q L             G Y ++    +G              P  +S L+      L
Sbjct: 427 -PAQAL----------AAFGEYQLLCALREG--------------PFGVSGLNDRFEQLL 461

Query: 796 AQREQI------RLHEGDKIRWTKNDRDRGLNNNDIARVISADKA-GIRV--EASDGTIH 846
            Q+ +I      R +EG  +   +ND   GL N DI   I+ D+  G+RV  +  DG++ 
Sbjct: 462 GQKRKINRTPHSRWYEGRPVMIARNDSALGLFNGDIG--IALDRGLGLRVWFQMPDGSVK 519

Query: 847 DLKAGDPMMERISLAYALNMHAAQGITTDTAIAVMSHKESNLSNQRLFNVTVTRVRDDIQ 906
            ++     +     A+A+ +H +QG   + A  ++  + S +  + L    +TR R  + 
Sbjct: 520 SVQPS--RLPEHETAWAMTVHKSQGSEFNHAALILPTQLSPVITRELIYTAITRARQRLS 577

Query: 907 LFTDDREKLTQAIERNEGNKTSALETVGE 935
           L+ D+R  L     R E  + S L  + E
Sbjct: 578 LYADERVLLQAIATRTE--RRSGLSAIFE 604