Pairwise Alignments

Query, 268 a.a., Capsular polysaccharide ABC transporter, permease protein KpsM from Sphingobium sp. HT1-2

Subject, 259 a.a., cell surface polysaccharide export ABC-2 transporter permease, close relative of Y20822wzm2 from Sinorhizobium meliloti 1021

 Score =  100 bits (248), Expect = 4e-26
 Identities = 70/249 (28%), Positives = 124/249 (49%), Gaps = 7/249 (2%)

Query: 21  RVIGALLMREVLTRYGRHNIGFFWLFVEPMLFTLGVTALWTALKAVHGSEIPITAFALTG 80
           RV+GALL+RE+ TR+G    G+ W  ++P    L +T ++ A+            F  TG
Sbjct: 12  RVVGALLVREMATRFGSKPGGYVWALLDPAAHILLMTVIFQAIARAPALGTSFALFFATG 71

Query: 81  YSTVLLWRNMPNRCVGAVQPNLALMYHRNVRIIDIFMSRLILE-AAGATISFIVLS--IF 137
           Y     ++ M      AV+ N AL+ + NV  ID  ++R +L+    + ++FIVL   + 
Sbjct: 72  YIAFQFYQAMTGYLNAAVKANKALLSYPNVAPIDTIVARFVLQMGTTSLVAFIVLGTIVA 131

Query: 138 FMALGWIVYPEDLLKVIVGWFLLAWFGCALAILLASYAEEYDMVEKLWHPASYLLFPLSG 197
            M +   ++   +L+ +    L   FG  +A++      +Y + E+++   +  LF +SG
Sbjct: 132 TMRVDTDIHWPSILEAV---GLACLFGLGVAMVNCVLFLKYPLYEQVFSIVNRPLFLISG 188

Query: 198 AGFMVSALPEEFRQFVLYLPMVHSVECIRDGFFGSHIKTFYDLEYMSTINAVLTFAALSQ 257
             F+  ++P  +R  VL  P+VH +   R GF+  +     D++Y+  I A LT  A   
Sbjct: 189 VFFLPDSIPAPYRDLVLINPLVHVIMGFRKGFYPEYRAIGLDMDYLYGI-AFLTLFAGML 247

Query: 258 MMRISRKVI 266
           +  +SRK +
Sbjct: 248 VFTLSRKTL 256