Pairwise Alignments

Query, 268 a.a., Capsular polysaccharide ABC transporter, permease protein KpsM from Sphingobium sp. HT1-2

Subject, 302 a.a., putative ABC type transporter from Phaeobacter inhibens DSM 17395

 Score = 67.4 bits (163), Expect = 3e-16
 Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 21  RVIGALLMREVLTRYGRHNIGFFWLFVEPMLFTLGVTALWTALKAVHGSEIPITAFALTG 80
           R + AL++RE+ TRYGR   G+ W  +EP+   L ++  ++ +            F  TG
Sbjct: 55  RTVAALVLREMSTRYGRTPGGYLWGILEPLAAILFLSLGFSLVIRTPSLGTSFLLFYATG 114

Query: 81  YSTVLLWRNMPNRCVGAVQPNLALMYHRNVRIIDIFMSRLILEA-AGATISFIVLSIFFM 139
           +    L++ +      A+  +  L+ +  V  +D  ++R +L +  G  I+ ++++    
Sbjct: 115 FLPFNLYQTLSGTVARALAYSRPLLRYPAVTWLDAILARFVLNSLTGIVITTLLITGILA 174

Query: 140 ALGW---IVYPEDLLKVIVGWFLLAWFGCALAILLASYAEEYDMVEKLWHPASYLLFPLS 196
            +     I  P  +  + +   L    GC  A+L+  +     + +  W   +  LF  S
Sbjct: 175 VIDSRTAIDLPPLVEAITLAMVLGLGVGCINAVLMGLFP----LWDVAWSIITRPLFLAS 230

Query: 197 GAGFMVSALPEEFRQFVLYLPMVHSVECIRDGFFGSHIKTFYDLEYMSTINAVLTFAALS 256
           G  ++   LP   +  + Y P++H    +R GF+ ++   +    Y+  I   LT   L 
Sbjct: 231 GVIYIYEDLPPVAQDVLWYNPLLHITGLMRTGFYPTYNADYVSHAYVLLIGMTLTALGLI 290

Query: 257 QMMRISRKVI 266
            M R  R ++
Sbjct: 291 LMRRYHRVIL 300