Pairwise Alignments

Query, 365 a.a., DNA polymerase IV (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

 Score =  375 bits (963), Expect = e-108
 Identities = 192/352 (54%), Positives = 248/352 (70%)

Query: 3   APPPTLRKIIHIDMDAFYASVEQRDDPSLRGKAIAVGGGGPRGVVATCSYEARKFGVRSA 62
           +P   +RKIIHIDMDAFYASVEQRD+P LRGK +AVG    RGVVA  SYEARKFGV SA
Sbjct: 11  SPGGRVRKIIHIDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSA 70

Query: 63  MPGARARRLCPELLFVKPRFEVYRSVSAQIRAIFARFTDMIQPLSLDEAYLDVTQNKPGI 122
           MP   A+R CPEL+FV  RF+VYR+VS QI+AIFA +T +++PLSLDEAYLDVT+N  G+
Sbjct: 71  MPSVTAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGL 130

Query: 123 ASATQVAQEIRRLIQEETGLTASAGVSYNKLIAKLASDQNKPDGLCVVRPAEGADFMARM 182
             AT++A+EIR  I+ ET LTASAGVSYNK +AK+ASDQ KPDGL V+ P  G DF+  +
Sbjct: 131 KLATEIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQAL 190

Query: 183 PVRRIHGIGPVTAERMHKFGIETGADLRDRDLSFLQTHFGSSALFYYRAARGEDDRPVHE 242
           PV++ HG+GP TAE+M + GIETGADL+ RDL+FLQ HFG S  ++Y  ARG D+R V  
Sbjct: 191 PVKKFHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKP 250

Query: 243 RQERKSVSVEDTFFEDLVAEEALLREIERIAQSLWARIEKAQAYGRTVVLKVKFADFRII 302
            + RKS+  EDTF ED+   E     ++ +   +W   E +   G+T+ LKVK+ADF  I
Sbjct: 251 DRIRKSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFTQI 310

Query: 303 TRSRSFAAPVRSVEQLVDAGRALLKAQLPLRMGARLLGLGVHNLEGEGEAGE 354
           TRS++  AP+ SV ++ +    LL    P   G RLLG+ + +L+   +  E
Sbjct: 311 TRSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLDTVDDRSE 362