Pairwise Alignments

Query, 344 a.a., Transcriptional regulator, LacI family from Sphingobium sp. HT1-2

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  145 bits (365), Expect = 2e-39
 Identities = 108/342 (31%), Positives = 162/342 (47%), Gaps = 25/342 (7%)

Query: 13  STIADVAAAVGVSIRTVSRVLNQSPKVNAETRERVQKAIAALNFRPSMRARAFAMGRSFL 72
           +T+ DVA   GVS  TVSR L    KV++ TR+RV++A+    + P+  AR      S  
Sbjct: 2   ATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKT 61

Query: 73  IGMVHNDRNALVLDAVQRGIVGEAGRRGYELVVHPTPMDAAASVEDVLQFVRRSRTDGLV 132
           I  +  D        + RGI   A   GY +++  +           +  V   + DG++
Sbjct: 62  IVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRE-NSFVNLVFTKQADGML 120

Query: 133 VL----------PPVSGIAGLPEALAREHIPAVALSALPITGYADVILSPEREAAAQVAH 182
           +L          P    +   P  +A E  P + L  + I             +A +  +
Sbjct: 121 LLGTDLPFDVSKPEQKNLP--PMVMACEFAPELELPTVHIDNLT---------SAFEAVN 169

Query: 183 YLLELGHRRIAMVGGPANAISAQERRAGFVEALAAAGVTLLDE--AEGDYGFQSGLAAAE 240
           YL +LGH+RIA + GP +A   Q R  G+ +AL  AG+T+       GD+ F++G  A  
Sbjct: 170 YLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVR 229

Query: 241 RFLSLPTAPTAIFAANDVMAAGVLKCAGIKGVAVPQSLSVVGFDGSLLSHVVSPALTTIW 300
           + L+LP  PTAIF  ND MA G ++ A   G+ VPQ LSVVGFD    +    P LTTI 
Sbjct: 230 QLLALPEQPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTIS 289

Query: 301 RPFGDMARIATQQLIDRIEGQAVTA-ELPPPLRLVEAESSGP 341
           +P  ++ R A   +++ + G  V A       +LV  ES+ P
Sbjct: 290 QPRYEIGRQAMLMMLELLRGHDVRAGSRLLETKLVVRESAAP 331