Pairwise Alignments

Query, 265 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Sphingobium sp. HT1-2

Subject, 263 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score =  139 bits (349), Expect = 8e-38
 Identities = 94/268 (35%), Positives = 146/268 (54%), Gaps = 15/268 (5%)

Query: 5   LSIASWNINSVRARIDIVERFLTEEAPDILCLQETKVVNEIFPTDMFKRLGYVHQVLNGQ 64
           + IA+WNIN V+AR+D +  +L E  PDI CLQE K V+E FP    + LGY H   +GQ
Sbjct: 1   MKIATWNINGVKARLDGLVGWLRESNPDIACLQEIKSVDETFPRGEIEALGY-HVETHGQ 59

Query: 65  RMHHGVAIMSKVPIHEDDRF--DWQANGEARHV-GIRLDNG--VRIENVYVPAGGDVADR 119
           +  +GVA++SKV   E +R      A+ ++R + G+   NG  +R+  +Y+P G  V   
Sbjct: 60  KGFNGVALLSKVRPDEINRGLPGDPADEQSRFIEGVFSVNGGALRVCCLYLPNGNPVE-- 117

Query: 120 TVNPKFGQKLDFIERMIEWS--GALDNKPTILTGDFNIAPLECDVWSHKQLLDVVSHTPV 177
               K+  KL ++ R+  ++    +  +P IL GD+N+ P   D W  K   +   + P 
Sbjct: 118 --TEKYPYKLAWMRRLAAFAEQRLVLEEPLILAGDYNVIPEAHDCWDVKVWRNDALYLPE 175

Query: 178 ECELLGRLQASNDWVDIGRHFHPAPARLYTWWSYRAKDWAASDRGRRLDHMWMTRDVADK 237
                 RL+       +      AP  LY++W Y+A  W   + G R+DH+ ++ + ADK
Sbjct: 176 TRAAFRRLRNLGFTDAVRATSDEAP--LYSFWDYQAGCW-QKNFGIRIDHLMLSPEAADK 232

Query: 238 AVAHRVVEPARSWEKPSDHIPIITEFAF 265
            V+  + +  R+WEKPSDH+P+  EFAF
Sbjct: 233 LVSTSIEKHVRAWEKPSDHVPVTAEFAF 260