Pairwise Alignments

Query, 265 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Sphingobium sp. HT1-2

Subject, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis S2

 Score = 71.6 bits (174), Expect = 1e-17
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 25/262 (9%)

Query: 5   LSIASWNINSVRARI-DIVERFLTEEAPDILCLQETKVVN---EIFPTDMFKRLGYVHQV 60
           + + SWN+N +RA + +    FL  E+PDI+C+QETKV +   ++     F+   Y    
Sbjct: 1   MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQLGLDGYFQYWNYAE-- 58

Query: 61  LNGQRMHHGVAIMSKVPIHED--DRFDWQANGEARHVGIRLDNGVRIENVYVPAGGDVAD 118
              ++ + G AI +K+  +       + + N E R + +  D    + NVY P       
Sbjct: 59  ---RKGYSGTAIFTKIKPNNVILGMENSEHNNEGRVITLEFDE-YYLVNVYTPNSQRGLT 114

Query: 119 RTVNPKFGQKLDFIERMIEWSGALD-NKPTILTGDFNIAPLECDVWSHKQLLDVVSHTPV 177
           R    ++ QK D  E  + +   L+  KP +  GD N+A  E D+ + K  +     TP 
Sbjct: 115 RL---EYRQKWD--EDFLSYIKTLETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPE 169

Query: 178 ECELLGRLQASNDWVDIGRHFHPAPARLYTWWSYRAKDWAASDRGRRLDHMWMTRDVADK 237
           E      +  ++ ++D  R F+  P   Y+WWSYR  +  A + G R+D+  +++ + + 
Sbjct: 170 ERNGFDNI-VNSGFLDTFREFNNEPDN-YSWWSYRF-NARARNIGWRIDYFCISKSLRNN 226

Query: 238 AVAHRVVEPARSWEKPSDHIPI 259
                ++         SDH P+
Sbjct: 227 LKDAYIMPEVMG----SDHCPV 244