Pairwise Alignments

Query, 381 a.a., (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (EC 1.17.7.3) from Sphingobium sp. HT1-2

Subject, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  384 bits (986), Expect = e-111
 Identities = 197/356 (55%), Positives = 257/356 (72%), Gaps = 2/356 (0%)

Query: 14  IARRQSRQIMVGNVPVGGGAPVTVQTMTNTLTHDVKATIDQIRRCEDAGVDIIRVSCPDE 73
           I RR S +I VG+VP+G GAP+ VQ+MTNT T DV AT+ QI+  E  G DI+RVS P  
Sbjct: 9   IKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVRVSVPTM 68

Query: 74  ESTAALKQIVRAARVPIVADIHFHYKRALEAADAGAACLRINPGNIGSAARVKEVVDAAK 133
           E+  A K I +   VP+VADIHF Y+ AL+ A+ G  CLRINPGNIG+ AR++ VVD A+
Sbjct: 69  EAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRSVVDCAR 128

Query: 134 ANNCSIRIGVNAGSLERDLLEKYGEPCPEALVESALDHIKLLQDQDFHEYKVAVKASDVF 193
                IRIGVN GSLE+DL  KYGEP PEALVESA+ H+ +L   +F ++KV+VKASDVF
Sbjct: 129 DKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSVKASDVF 188

Query: 194 LAVAAYMQLADAVDCPLHLGITEAGGLIGGTVKSAIGIGNLLWAGIGDTIRVSLSAEPEE 253
           LAV +Y  LA  +D PLHLGITEAGG   G+VKSA+G+G LL  GIGDT+R+SL+A+P E
Sbjct: 189 LAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISLAADPVE 248

Query: 254 EVRVGYEMLKTLGIRTRGVKVISCPSCARQGFDVIRTVQALEERLQHINTPLSLSVLGCV 313
           E++VG+++LK+L IR+RG+  I+CPSC+RQ FDVI TV ALE+RL+ + TP+ +S++GCV
Sbjct: 249 EIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDVSIIGCV 308

Query: 314 VNGPGEARETDIGLTGGGNGKHMVYLSGVTD-HTIQDADMVDHIVRLVEAKAAEIE 368
           VNGPGEA  + +GL  G N K   Y  GV       + D+V  +   + AKAA ++
Sbjct: 309 VNGPGEAEVSHLGL-AGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAARLD 363