Pairwise Alignments

Query, 381 a.a., (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (EC 1.17.7.3) from Sphingobium sp. HT1-2

Subject, 371 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  377 bits (969), Expect = e-109
 Identities = 194/355 (54%), Positives = 257/355 (72%), Gaps = 2/355 (0%)

Query: 14  IARRQSRQIMVGNVPVGGGAPVTVQTMTNTLTHDVKATIDQIRRCEDAGVDIIRVSCPDE 73
           I RR S +I VGNVP+G GAP+ VQ+MTNT T DV+AT+ QIR  E  G DI+RVS P  
Sbjct: 7   IKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVRVSVPTM 66

Query: 74  ESTAALKQIVRAARVPIVADIHFHYKRALEAADAGAACLRINPGNIGSAARVKEVVDAAK 133
           ++  A K I ++  VP+VADIHF Y+ AL+ A+ G  CLRINPGNIG+  R++ VV+ A+
Sbjct: 67  DAAEAFKLIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRSVVECAR 126

Query: 134 ANNCSIRIGVNAGSLERDLLEKYGEPCPEALVESALDHIKLLQDQDFHEYKVAVKASDVF 193
             N  IRIGVN GSLE+DL++KY EP PEAL+ESA+ H+ +L   +F ++KV+VKASDVF
Sbjct: 127 DKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSVKASDVF 186

Query: 194 LAVAAYMQLADAVDCPLHLGITEAGGLIGGTVKSAIGIGNLLWAGIGDTIRVSLSAEPEE 253
           LAV +Y  LA  +  PLHLGITEAGG   G VKSA+G+G LL  GIGDT+R+SL+A+P E
Sbjct: 187 LAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISLAADPVE 246

Query: 254 EVRVGYEMLKTLGIRTRGVKVISCPSCARQGFDVIRTVQALEERLQHINTPLSLSVLGCV 313
           E++VG+++LK+L IR+RG+  I+CPSC+RQ FDVI TV  LE RL+ + T + +S++GCV
Sbjct: 247 EIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDVSIIGCV 306

Query: 314 VNGPGEARETDIGLTGGGNGKHMVYLSGVTDHTIQDAD-MVDHIVRLVEAKAAEI 367
           VNGPGEA  + IGLT GG+ K   Y  G       D D +VD +   + AKA+++
Sbjct: 307 VNGPGEALVSHIGLT-GGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQM 360