Pairwise Alignments

Query, 274 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Sphingobium sp. HT1-2

Subject, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (275), Expect = 3e-29
 Identities = 85/260 (32%), Positives = 125/260 (48%), Gaps = 17/260 (6%)

Query: 1   MTDKLPYAEVIGDPIDHSKSPLIHNFWLQALDIEAEYKKTHVTPEGLSA----YFLQRRA 56
           M  ++    V G+PI+HSKSP IH  + +       Y    V  +G +     +F Q   
Sbjct: 1   MASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGR 60

Query: 57  DPDWLGCNVTIPHKIAVMDYTDDPGGVRDRIGAMNTIASETAGPLIGTNTDAGGFLQPLL 116
                GCNVT+P K     + D         GA+NT+     G ++G NTD  G +Q LL
Sbjct: 61  -----GCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLL 115

Query: 117 RDK--WKGRHAVLIGAGGAARAILFALTSLGVPEITIMARDPAKGQALLDRAGVKGKVIG 174
             +   KG   +LIGAGGAAR +L  L       IT+  R  AK + L +     G+V  
Sbjct: 116 AQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKA 175

Query: 175 MT--DALPAADLLVNSTSLGMVGQ-PALDLDLSPLPASATVYDIVYAPLETGLLKAARDR 231
                   + D+++NSTS  + G+ PA+D  +    + +  YD++Y    T   + AR  
Sbjct: 176 QAFEQLKQSYDVIINSTSASLDGELPAIDPVI--FSSRSVCYDMMYGKGYTVFNQWARQH 233

Query: 232 G-LKTLDGLEMLIGQAALAF 250
           G  + +DGL ML+GQAA +F
Sbjct: 234 GCAQAIDGLGMLVGQAAESF 253