Pairwise Alignments

Query, 274 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Sphingobium sp. HT1-2

Subject, 288 a.a., shikimate 5-dehydrogenase from Synechococcus elongatus PCC 7942

 Score =  142 bits (357), Expect = 1e-38
 Identities = 104/274 (37%), Positives = 135/274 (49%), Gaps = 22/274 (8%)

Query: 1   MTDKLPYAEVIGDPIDHSKSPLIHNFWLQALDIEAEYKKTHVTPEGLSAYFLQRRADPDW 60
           +T +     +IGDPI+HS SPLI N  +  L ++  Y    V    L A  L   A    
Sbjct: 4   LTGRTRLLGIIGDPIEHSLSPLIQNAAIAELGLDYCYVPFPVKGADL-ATALAGLAAIGV 62

Query: 61  LGCNVTIPHKIAVMDYTDDPGGVRDRIGAMNTIASETAGPLIGTNTDAGGFLQPL--LRD 118
            G NVTIPHK AVM        +   +G++NT+     G  +GTNTD  GFL PL  LR 
Sbjct: 63  QGFNVTIPHKQAVMPLLSQVSELAQSVGSVNTVWQTEQG-WVGTNTDVLGFLAPLQTLRS 121

Query: 119 KWKGRHAVLIGAGGAARAILFALTSLGVPEITIMARDPAKGQALLDRAGVKGKVI----- 173
            W G   VL+G GGAARA++     LG   I  + RD  KG A     G +   +     
Sbjct: 122 DWSGCRVVLLGCGGAARAVVAGCLQLGCSAIATVVRDAQKGDAFQQSWGDRADSLTIHDW 181

Query: 174 -GMTDALPAADLLVNSTSLGMVGQPALDLDLSPLPASAT--------VYDIVYAPLETGL 224
             + D L  ADL+VN+T LGM   P   ++ SPL  SA          YD++Y P  T  
Sbjct: 182 SDIPDVLSTADLVVNTTPLGM--DP--HIERSPLDNSAAQQLRPETIAYDLIYTPSPTRF 237

Query: 225 LKAARDRGLKTLDGLEMLIGQAALAFDIFFDAEA 258
           L+ A  +G   +DGLEML+ Q A    I+  AEA
Sbjct: 238 LQQAIAQGCHAIDGLEMLVQQGAAGLKIWTGAEA 271