Pairwise Alignments

Query, 274 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Sphingobium sp. HT1-2

Subject, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

 Score =  121 bits (304), Expect = 1e-32
 Identities = 86/264 (32%), Positives = 141/264 (53%), Gaps = 16/264 (6%)

Query: 1   MTDKLPYAEVIGDPIDHSKSPLIHNFWLQALDIEAEYKKTHVTPEGLSAYFLQRRADPDW 60
           +  K     +IG P+DHS SP++HN  ++ L I   Y    V+ E L       +A  ++
Sbjct: 2   INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAF-NF 60

Query: 61  LGCNVTIPHKIAVMDYTDDPGGVRDRIGAMNTIASETAGPLIGTNTDAGGFLQPLLRDKW 120
            G N+TIPHK+ +M Y D+     + IGA+NT+  E  G  IG NTD  G ++  L +K 
Sbjct: 61  RGFNITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIEN-GKAIGYNTDGIG-VKKALEEKT 118

Query: 121 K---GRHAVLIGAGGAARAILFALTSLGVPEITIMARDPAKGQALLDRAGVKGKVI---- 173
                ++ ++IG+GGA+RA+ F L       +TI+ R+  K + L      K K      
Sbjct: 119 GILINKNILIIGSGGASRAVSFELAKDN--NLTIVNRNIEKAENLSKEISRKLKKENPLN 176

Query: 174 --GMTDALPAADLLVNSTSLGMVGQPALD--LDLSPLPASATVYDIVYAPLETGLLKAAR 229
             G+   +   D+++N+T +GM     ++  + L+ +   A V D++Y PLE   LK A+
Sbjct: 177 YGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAK 236

Query: 230 DRGLKTLDGLEMLIGQAALAFDIF 253
             G KT++G+ ML+ Q A++F+I+
Sbjct: 237 KYGAKTINGIGMLVYQGAVSFEIW 260