Pairwise Alignments

Query, 697 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Sphingobium sp. HT1-2

Subject, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

 Score =  268 bits (685), Expect = 7e-76
 Identities = 182/545 (33%), Positives = 284/545 (52%), Gaps = 38/545 (6%)

Query: 82  WLSYDQIPSVMVDAMVSTEDRRFYMHPGVDPVGMARAAWVALERRGSGRRWQGASTITQQ 141
           +L  DQ P V+VDA++ TEDR FY H GV P+ + RA  V L+   +GR  QG ST+TQQ
Sbjct: 182 FLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLK---AGRTVQGGSTLTQQ 238

Query: 142 VARNIFLNNSYSWGRKVREMVLAMALERKFSKQQILELYLNKVYFG-GGA---YGIDAAS 197
           +A+NIFL++  +  RK+RE  +A+ ++ ++SK +ILE YLN+VY G  GA   +G   AS
Sbjct: 239 LAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLAS 298

Query: 198 RKFFGHPAQSLDLPEAAIIAGLVKAPSSYSPTADAEAAIGRAGVVLDLMQENGKISAADH 257
           R +FG P Q L + + A++ G+VK PS Y+P   AE A  R  +VL LM E+  ++A ++
Sbjct: 299 RLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEY 358

Query: 258 ANA---NLDGVRMAPEPPQNSVRYFTDWALPQLDTLID--EPNEPLEVYTTIDLGMQNAA 312
             A    LD V+   +       YF   ++   + L D  + +  L V+T++D   Q+  
Sbjct: 359 QQAVTRPLD-VQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKL 417

Query: 313 TAAVKANV-------SNGMQGALVSLDR-DGAVRAMVGGLDYVTSNYNRATTAVRQPGSA 364
             A+   +          ++ A +++DR  G +RAMVGG       +NR   A RQ GS 
Sbjct: 418 EQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSL 477

Query: 365 WKIFVYMAAL--EAGYTPDTGVTDEPVTING-----WSPRNSNGRFAGAIDIRTAFAYSI 417
            K  VY+ AL     Y   T + D+P+T+ G     W+PRN + ++ G + +  A A S+
Sbjct: 478 VKPAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSL 537

Query: 418 NTVAAKLGVEVGFPTVADMARRFGIT-TPINTHPSMVLGTSDVRLIDMTRAFASIARKGV 476
           N     LG+++G   V+    + G+    I   PSM+LG+  +    + + + ++   G 
Sbjct: 538 NVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGK 597

Query: 477 AVTPYGITKVTTADGRMLYQHQDDTSRVL--VAPWVAAGMTDLMQTAVSTGTGR---AAQ 531
                 +  V   +G +LY+     S+ +   A W+    T  M+  V  GTGR   A  
Sbjct: 598 KAPLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLT---TYAMKQGVQEGTGRYLNAQF 654

Query: 532 IGRPVAGKTGTTNSGKDGWFLGFSSGITTGVWVGRDDAKAVPSLYGGRAPAHAFADYMKV 591
               +AGKTGTTN  +D WF+G      T +W+GRDD +    L G       +A Y+K 
Sbjct: 655 SSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPT-KLTGASGALRVYAQYLKY 713

Query: 592 AVAKR 596
            + ++
Sbjct: 714 RIPEK 718