Pairwise Alignments

Query, 697 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Sphingobium sp. HT1-2

Subject, 768 a.a., penicillin-binding protein 1B (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  246 bits (629), Expect = 2e-69
 Identities = 169/537 (31%), Positives = 273/537 (50%), Gaps = 35/537 (6%)

Query: 82  WLSYDQIPSVMVDAMVSTEDRRFYMHPGVDPVGMARAAWVALERRGSGRRWQGASTITQQ 141
           ++S +++P  +V A++  EDR FY H GV+P  + RAA+V +    +GR  QG ST+TQQ
Sbjct: 175 FVSTEEMPKPIVQALLLVEDRSFYEHHGVNPFAILRAAFVNIT---AGRTVQGGSTLTQQ 231

Query: 142 VARNIFLNNSYSWGRKVREMVLAMALERKFSKQQILELYLNKVYFG----GGAYGIDAAS 197
           +A+N FL++  S  RKVRE ++A+ ++ ++SK +ILE YLN+VY G       +G+  AS
Sbjct: 232 LAKNFFLSSERSLLRKVREALMAVIIDFRYSKDEILEAYLNEVYMGQDKSRAVHGMGLAS 291

Query: 198 RKFFGHPAQSLDLPEAAIIAGLVKAPSSYSPTADAEAAIGRAGVVLDLMQENGKISAADH 257
           + +FG P   L   + A +   +K PS Y+P    E ++ R  +VL L+ E+G+++ A +
Sbjct: 292 QFYFGRPIGELTTAQQAFLVAAIKGPSYYNPWRYPERSLERRDLVLRLLMESGELNTAQY 351

Query: 258 --ANANLDGVRMAPEPPQNSVRYFTDWALPQL-----DTLIDEPNEPLEVYTTIDLGMQN 310
             A  +  G+R A +P    +  F      ++     D L+ +    +++YTT+D   Q 
Sbjct: 352 KVAVESPLGLRNANKPVHQKLPSFYALVKQEVNQRYGDALLKQSG--VKIYTTLDPMAQE 409

Query: 311 AATAAVKANV------SNGMQGALVSLDR-DGAVRAMVGGLDYVTSNYNRATTAVRQPGS 363
           AA  AV          +  +Q  +V  D+  G + AMVG        YNRA    R  GS
Sbjct: 410 AAEIAVTQTFKSLDKGNKSLQIGMVVTDKYTGGIAAMVGDKTPGFDGYNRAVEIRRPIGS 469

Query: 364 AWKIFVYMAAL--EAGYTPDTGVTDEPVTING-----WSPRNSNGRFAGAIDIRTAFAYS 416
             K FVY  AL   + +T  + + D+P+T+       WSP+N +  F+G + + TA   S
Sbjct: 470 LIKPFVYATALAPNSQFTLASPLKDQPITLKNEQGKTWSPQNFDKTFSGQVSLLTALKKS 529

Query: 417 INTVAAKLGVEVGFPTVADMARRFGITTPINTHPSMVLGTSDVRLIDMTRAFASIARKGV 476
           +N     LG+ VG   V     + G   P+N +PSM+LG  +   + + + + ++A  G 
Sbjct: 530 MNVPTVNLGIAVGVDAVVTTLAKSGWEEPLNEYPSMLLGAVNGSPLMVAQVYQTLADSGA 589

Query: 477 AVTPYGITKVTTADGRMLYQHQDDTSRVLVAP---WVAAGMTDLMQTAVSTGTGRAAQIG 533
                 +T V  +D + L   +    + +       V   M  ++++  +T  G A   G
Sbjct: 590 YRKLTTVTAVLDSDNQPLPVTRSAKEQAITPDTDFLVQYAMQQVVRSGTATRLGNAFP-G 648

Query: 534 RPVAGKTGTTNSGKDGWFLGFSSGITTGVWVGRDDAKAVPSLYGGRAPAHAFADYMK 590
             +AGKTGT+N  +D WF GF       +WVGRDD     SLYG       +  ++K
Sbjct: 649 VALAGKTGTSNDSRDSWFAGFDERNVAAIWVGRDD-NGKTSLYGSSGAMAVYQAFLK 704