Pairwise Alignments

Query, 418 a.a., Transcription termination factor Rho from Sphingobium sp. HT1-2

Subject, 416 a.a., Flagellum-specific ATP synthase FliI from Pseudomonas fluorescens FW300-N2E2

 Score = 58.5 bits (140), Expect = 4e-13
 Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 14/215 (6%)

Query: 160 RVIDIVSPQGKGQRTLIVAPPRVGKTVMLQNIAKAITDNHPEVFLIVLLIDERPEEVTD- 218
           RVID +   G GQR  I A    GKT ++  +   I     EVF+I L I ER  EVT+ 
Sbjct: 128 RVIDGLLTCGVGQRIGIFAAAGSGKTTLINML---IEHTDAEVFVIGL-IGERGREVTEF 183

Query: 219 ---MQRSVKGE---VVSSTFDEPATRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLGR 272
              +++S K     VV +T D  +      A      A+   +    VV+LLDS+TR  R
Sbjct: 184 IAHLRQSPKHSRCVVVFATSDFSSVDRCNSALQATTIAEYFRDQGWRVVLLLDSLTRYAR 243

Query: 273 AYNTVVPSSGKV-LTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMDEVI 331
           A   +  ++G+     G  A+      R       +   GS++   T L+++    D + 
Sbjct: 244 ARRDLALAAGEAPARRGYPASVFDALPRLLERP-GVTATGSITAWYTVLLESDDEPDPIA 302

Query: 332 FEEFKGTGNSEIVLDRKVADKRIFPALDVGKSGTR 366
            EE +   +  + L R +A K  +PA+DV +S +R
Sbjct: 303 -EEIRSILDGHVYLSRALAAKGHYPAIDVLRSVSR 336