Pairwise Alignments

Query, 418 a.a., Transcription termination factor Rho from Sphingobium sp. HT1-2

Subject, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 30/277 (10%)

Query: 134 DNLTPLYPEQKLRLDTL--DPTIK-------DKSARVIDIVSPQGKGQRTLIVAPPRVGK 184
           D L P+Y +Q+  L+ +  +P  +       D   + I+ +   GKGQR  + A   VGK
Sbjct: 113 DGLGPIYTDQRASLNAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGK 172

Query: 185 TVMLQNIAKAITDNHPEVFLIVLLIDERPEEVTDMQRSVKGE-------VVSSTFDEPAT 237
           +V L  + +  T       ++V LI ER  EV +    + G        VV++  D    
Sbjct: 173 SVTLGMMTRGTTAQ----VVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPL 228

Query: 238 RHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKV-LTGGVDANALQR 296
             ++  +  +  A+   +   DV++L+DS+TR  +A   +  S G+   T G   +   +
Sbjct: 229 MRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAK 288

Query: 297 -PKRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIF 355
            P     A       GS++   T L + G  + + I +  +   +  IVL R++AD   +
Sbjct: 289 LPALVERAGNGGPHQGSITAFFTVLTE-GDDLQDPIADASRAILDGHIVLSREMADAGHY 347

Query: 356 PALDVGKSGTR-------KEELLVEKPTLSKMWVLRR 385
           PA+DV KS +R        E LL+ K     + V R+
Sbjct: 348 PAIDVEKSVSRVMPQITTDEHLLMSKAVRQILSVCRK 384