Pairwise Alignments

Query, 616 a.a., tRNA-5-carboxymethylaminomethyl-2- thiouridine(34) synthesis protein MnmG from Sphingobium sp. HT1-2

Subject, 631 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG from Vibrio cholerae E7946 ATCC 55056

 Score =  536 bits (1381), Expect = e-156
 Identities = 299/620 (48%), Positives = 392/620 (63%), Gaps = 14/620 (2%)

Query: 4   SYDVIVVGGGHAGCEAAAAAARKGAAVALLTFERATVGAMSCNPAIGGLGKGHLVREVDA 63
           ++DVIVVGGGHAG EAA AAAR G    LLT    T+G MSCNPAIGG+GKGHLV+EVDA
Sbjct: 6   TFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDA 65

Query: 64  LDGLIGRAADAGAIHYRMLNSSKGAAVQGPRVQADRKRYKAAIHQMLDAQAGLDIVEGEA 123
           + GL+ +A D   I +R LN+SKG AV+  R QADR  YKA +  +L+    L + +   
Sbjct: 66  MGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLFQQAV 125

Query: 124 VGLIVREGTVAGLALADGRTLEAPSVVLATGTFLGGKLFRGEDVDVGGRTGERAATALGV 183
             +IV    + G+    G    A +VVL  GTFLGGK+  G +   GGR G+  + AL  
Sbjct: 126 DDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSIALAH 185

Query: 184 QLREMGLPIGRLKTGTPPRIDGRTIDWAVLEEQASDGEGWTMSPLS--DHRPLPQLACAI 241
           +LRE+   + RLKTGTPPRID  ++D++VLE Q  D      S +   +H P  Q+ C I
Sbjct: 186 RLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPR-QIPCYI 244

Query: 242 TRTNERTHAIIREGLGRSPLFSGAIEGRGPRYCPSIEDKVIRFGDRDGHQIFLEPEGLDD 301
           T TNERTH +IR  L RSP+++G IEG GPRYCPSIEDKV+RF D+D HQIF+EPEGL  
Sbjct: 245 THTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEGLTT 304

Query: 302 ALVYPNGISTSLPADVQQAMIRSMRGLEQAEIVVPGYAVEYDHIDPRALDASLEVRALPG 361
             +YPNGISTSLP DVQ  ++RSM+G E A IV PGYA+EYD  DPR L  + E + + G
Sbjct: 305 TELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKYIHG 364

Query: 362 LFCAGQINGTTGYEEAAAQGLVAGTNAAARARSEAPMILDRASSYIGVMIDDLVLQGVTE 421
           LF AGQINGTTGYEEAAAQGL+AG NA+  ++ +      R  +Y+GV+IDDL   G  E
Sbjct: 365 LFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMGTKE 424

Query: 422 PYRMLTARAEYRLRLRADNAETRLGEIGRTHGIIGPDRAARFAAR----ASARAAIEAEL 477
           PYRM T+RAEYRL LR DNA+ RL E  R  G++   R ARF  +    A  R  ++   
Sbjct: 425 PYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQETW 484

Query: 478 ARPFTATEMARAGAAVRQDGARRSLFE-WARFPEVQAELLVTL---APNLAEVPADLRAE 533
             P  +  + +    ++   +R +  E   R PE+  ELL TL   AP L +  A  + E
Sbjct: 485 MNP-NSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYELLTTLPAFAPALEDAEAAEQVE 543

Query: 534 ILEDAHYAPYLERQDAEIAALRRDERVAIPADFDFASVGGLSTEMIERLDGARPDTLAAA 593
           I     Y  Y++RQ  EI    R E   +PA+ D+  V GLS E++ +L+ A+P+T+  A
Sbjct: 544 I--QVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGIA 601

Query: 594 GRVRGITPAALAAILVHVRR 613
            R+ GITPAA++ +LVH+++
Sbjct: 602 SRISGITPAAISILLVHLKK 621