Pairwise Alignments
Query, 592 a.a., Bis-ABC ATPase Uup from Sphingobium sp. HT1-2
Subject, 555 a.a., energy-dependent translational throttle protein EttA from Vibrio cholerae E7946 ATCC 55056
Score = 272 bits (695), Expect = 3e-77
Identities = 171/503 (33%), Positives = 260/503 (51%), Gaps = 51/503 (10%)
Query: 33 RLALIGRNGAGKTTLLKLIGGQIEADEGIRSVQPGARVVTLEQDPDVSAFKTLHD----- 87
++ ++G NGAGK+TLL+++ G + +G QPG +V L Q+P + KT+ +
Sbjct: 34 KIGVLGLNGAGKSTLLRIMAGIDKDIDGEARPQPGLKVGYLPQEPKLDESKTVREVVEEA 93
Query: 88 -----FALA------GAFAPPAHEVEAIADQLG-------------IDLSREAAT----- 118
+AL A+A P + +A+A + G +D + E A
Sbjct: 94 VADVAYALKRLDEVYAAYAEPDADFDALAKEQGELEALIQAKNGHNLDNALERAADALRL 153
Query: 119 ---------ASGGERRRAAIARALASEPDLLLLDEPTNHLDIAAIDWLESWLARYTGAFI 169
SGGERRR AI R L PD+LLLDEPTNHLD ++ WLE +L Y G +
Sbjct: 154 PEWDAQVKYLSGGERRRVAICRLLLENPDMLLLDEPTNHLDAESVAWLERFLVDYAGTVV 213
Query: 170 VISHDRAFLTRLTRQTLWLDRGQMRRNEIGFGGFEDWMEAVYAEEARAAEKLDAKLKI-- 227
I+HDR FL L LDRG+ + G + W+E A + A + A+ K
Sbjct: 214 AITHDRYFLDNAAGWILELDRGEGIPWQ---GNYTSWLEQKDARLKQEASQEKARQKTIE 270
Query: 228 -EAHWLERGVTARRKRNQGRLAKLWEMRAQRAAMQGPQGTAKIAVASDDSKTKSVIKAEH 286
E W+ + R+ +++ R+A+ E+ Q Q T ++ + + VI+ ++
Sbjct: 271 KELEWVRQNPKGRQAKSKARMARFEEL--QNTEHQKRNETNELFIPPGERLGDKVIEVKN 328
Query: 287 VTKTFGDRTIINDFSLRVQRGDRIGIVGGNGAGKSTLLKLLTGELAPDSGAVTLAKTLDM 346
+TK+F R +I+D S + +G +GI+G NGAGKSTL K+L+G PDSG + L T+ +
Sbjct: 329 LTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGAGKSTLFKMLSGVEKPDSGTIELGDTVKL 388
Query: 347 IFIDQQRSLMQGDKSVRDVLAEGGDWIDVRGVRKHVHGYLKDFLFDPSLAEAKVGTLSGG 406
+DQ R M +V ++EG D I + Y F F + +G LSGG
Sbjct: 389 ASVDQFRDSMNDKHTVFQEISEGADIIRINNFEIPARAYCSRFNFKGVDQQKVIGELSGG 448
Query: 407 ERSRLLFAREFARESNLLVLDEPTNDLDLETLDLLQEVIADYDGTVLIVSHDRDFLDRTV 466
ER+R+ A+ N+L+LDEPTNDLD+ETL L+E + ++ G +++SHDR FLDR
Sbjct: 449 ERNRVHLAKLLKAGGNVLLLDEPTNDLDVETLRALEEALLEFPGCAMVISHDRWFLDRIA 508
Query: 467 TVTLGLDGSGKVDVIVGGYADWI 489
T L GKV+ G Y +++
Sbjct: 509 THILDYRDEGKVNFYEGNYTEYM 531
Score = 97.1 bits (240), Expect = 2e-24
Identities = 78/250 (31%), Positives = 118/250 (47%), Gaps = 42/250 (16%)
Query: 294 RTIINDFSLRVQRGDRIGIVGGNGAGKSTLLKLLTGELAPDSGAVTLAKTLDMIFIDQQR 353
R I+ D SL G +IG++G NGAGKSTLL+++ G G L + ++ Q+
Sbjct: 19 RQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIDGEARPQPGLKVGYLPQEP 78
Query: 354 SLMQGDKSVRDVLAEGGDWIDVRGVRKHV--------------------HGYLKDFL--- 390
L + K+VR+V+ E DV K + G L+ +
Sbjct: 79 KLDES-KTVREVVEEAV--ADVAYALKRLDEVYAAYAEPDADFDALAKEQGELEALIQAK 135
Query: 391 ----FDPSLA-----------EAKVGTLSGGERSRLLFAREFARESNLLVLDEPTNDLDL 435
D +L +A+V LSGGER R+ R ++L+LDEPTN LD
Sbjct: 136 NGHNLDNALERAADALRLPEWDAQVKYLSGGERRRVAICRLLLENPDMLLLDEPTNHLDA 195
Query: 436 ETLDLLQEVIADYDGTVLIVSHDRDFLDRTVTVTLGLDGSGKVDVIVGGYADWIAKRDPR 495
E++ L+ + DY GTV+ ++HDR FLD L LD G+ G Y W+ ++D R
Sbjct: 196 ESVAWLERFLVDYAGTVVAITHDRYFLDNAAGWILELD-RGEGIPWQGNYTSWLEQKDAR 254
Query: 496 RAPKAEKKEA 505
+A +++A
Sbjct: 255 LKQEASQEKA 264
Score = 94.0 bits (232), Expect = 1e-23
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 9/229 (3%)
Query: 5 ILSFENLGLSQGSHWLFRHIDIHVGQRDRLALIGRNGAGKTTLLKLIGGQIEADEGIRSV 64
++ +NL S L + + + + +IG NGAGK+TL K++ G + D G +
Sbjct: 323 VIEVKNLTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGAGKSTLFKMLSGVEKPDSGTIEL 382
Query: 65 QPGARVVTLEQDPDV-----SAFKTLH---DFALAGAFAPPAHEVEAIADQLGIDLSREA 116
++ +++Q D + F+ + D F PA + + G+D +
Sbjct: 383 GDTVKLASVDQFRDSMNDKHTVFQEISEGADIIRINNFEIPARAYCSRFNFKGVDQQKVI 442
Query: 117 ATASGGERRRAAIARALASEPDLLLLDEPTNHLDIAAIDWLESWLARYTGAFIVISHDRA 176
SGGER R +A+ L + ++LLLDEPTN LD+ + LE L + G +VISHDR
Sbjct: 443 GELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETLRALEEALLEFPGCAMVISHDRW 502
Query: 177 FLTRLTRQTL-WLDRGQMRRNEIGFGGFEDWMEAVYAEEARAAEKLDAK 224
FL R+ L + D G++ E + + +W++ +A ++ K
Sbjct: 503 FLDRIATHILDYRDEGKVNFYEGNYTEYMEWLKQTLGAQAAEPHRIKYK 551