Pairwise Alignments

Query, 316 a.a., LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) from Sphingobium sp. HT1-2

Subject, 322 a.a., Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  124 bits (312), Expect = 2e-33
 Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 22/293 (7%)

Query: 3   PGVSIIETTIGEAQAGLRLDRALAELLPDLSRERIKALIVEGQIVSGGRSLNPSMKVAVG 62
           PGV ++E  +    AG R+D  L   L  + +  I  ++ +G++      + P  K+  G
Sbjct: 13  PGVQLLE--VSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPEYKLQAG 70

Query: 63  QDYSITL--------PAPVALDAVAQDIPLDIVHEDADLIVVDKPAGLVVHPAAGNLDGT 114
               +          P P+A   + Q +   I++ED  LIV++KPAG+ VH  +G   G 
Sbjct: 71  DIVRVPPVRVPERDEPVPLA-QGLLQRLEASIIYEDKALIVINKPAGIAVHGGSGLNFGV 129

Query: 115 LVNALLHHCDGQLSGIGGVARPGIVHRIDKDTSGLLVVAKSDKAHEGLARQFKDHSIDRL 174
           +        D +           +VHR+D+DTSGLL++AK       L  Q +   +D+ 
Sbjct: 130 IEAFRQLRPDAK--------ELELVHRLDRDTSGLLMIAKKRSMLRHLHEQLRGDGVDKR 181

Query: 175 YAAIVYGIPAPGSGTVDAWIGRSDADRKKMAVHREGRGKHAVTHYRVMERLRG-AAMVEC 233
           Y A+V G        V A + +S+    +  V     GK A+T ++V+ R    A +VE 
Sbjct: 182 YMALVRGRWETSIKQVRAPLLKSNLRSGERMVEVNEEGKEALTVFKVLRRFDDFATLVEA 241

Query: 234 RLETGRTHQVRVHMAHLGHPLIGDPVYGRDRKGFKSILETLGFKRQALHAKRL 286
           +  TGRTHQ+RVH  H GH + GD  YG D   F   +  LG KR  LHA  L
Sbjct: 242 KPVTGRTHQIRVHTLHAGHCIAGDSKYGDD--DFTKEIRDLGGKRLFLHAYML 292