Pairwise Alignments

Query, 234 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 191 a.a., 3'-5' exonuclease from Methanococcus maripaludis S2

 Score = 41.2 bits (95), Expect = 1e-08
 Identities = 51/199 (25%), Positives = 76/199 (38%), Gaps = 48/199 (24%)

Query: 1   MILGYDTETTGLPDWHQPSDAAHQPHVVQIAMIRQDMEGN---------EIDRFVSIVRP 51
           M +  DTETTGL          H   + Q++ +  D + N          +D        
Sbjct: 1   MYVFLDTETTGL----------HPGQIAQLSYLVTDEDLNLKKVFNQYYSVDHMSRSAAK 50

Query: 52  GPGAVMEPEAFKAHGITLEQAMDEGADPIEVLERFLAWADNAQLMVGHNESFDRRLMRIM 111
             G  +E     ++G+T E  +DE  D +E             +++GHN SFD R ++  
Sbjct: 51  VHGLTVEILDELSNGMTFEDTVDEVRDDLE-----------DSVIIGHNISFDIRFLKAE 99

Query: 112 AARHKGFKWEPSCPNFCTLYRSKHIINLPPTERMRLAGVPGPKSPNLGECIHYFFGETLE 171
             R  G ++ P    FCT++    I  LP  +R +      PK   L E +     E LE
Sbjct: 100 FER-LGPEYVPK-DKFCTMFHFTPICKLPGQKRYK-----RPKLVELMEFLEQCPNEGLE 152

Query: 172 -----------GAHDAGVD 179
                      G HDA  D
Sbjct: 153 FTKKAYGCSDVGFHDARYD 171