Pairwise Alignments

Query, 225 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score = 48.1 bits (113), Expect = 4e-10
 Identities = 65/223 (29%), Positives = 86/223 (38%), Gaps = 54/223 (24%)

Query: 4   HPALAQRPRELCQLAGEWRGGVPDHGTWVEE-KLDGVRA-CWIGG---ELLTREGIP-IG 57
           HP L +RP              PD   WV E KLDG RA   I G    L TR G+    
Sbjct: 63  HPTLKKRP--------------PDGADWVHEIKLDGYRAQLHINGGKITLYTRTGLDWTT 108

Query: 58  GIDHIAYRLRSIEKKAGHGIFFDGEFLAPG-----GYRATLRHIGQGLRAPEQGTLHLFD 112
             + IA    + E  AGH +  DGE    G      ++A  R + +  R+    T   FD
Sbjct: 109 EFEAIA---TAAEDLAGHDVVMDGEVTVFGKTGLPDFQALRRELAK--RSSPNLTFQAFD 163

Query: 113 ALPSGEWAQGGSHVPLFERKRQLQEWVALAADPSADWEWRPGTKGREPIVPALAVIQDTW 172
            L    +      VPL ERKR L+E +  AA   A  ++    +G EP+           
Sbjct: 164 LLHLDGYDL--RRVPLIERKRVLRELIGDAAGTIAYVDYLELEEG-EPVY---------- 210

Query: 173 AATQADVERLANEIWARGGEGVMLKDAESPYRRTRSNAWLKYK 215
                            G EG++ K  ++PYR  R   W K K
Sbjct: 211 -----------RHACKMGLEGIVSKRKDAPYRSGRQEIWTKTK 242