Pairwise Alignments

Query, 560 a.a., HlyB/MsbA family ABC transporter from Sphingobium sp. HT1-2

Subject, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score = 90.5 bits (223), Expect = 2e-22
 Identities = 119/518 (22%), Positives = 223/518 (43%), Gaps = 37/518 (7%)

Query: 30  IVYTVAISLLSLATPISVQLLINSVARTALVAPLWILSGVLLALLLVVAG-----LSALR 84
           ++++  + +L+L +P+  Q++++ V    LV   W    VL+   LV+ G     L  LR
Sbjct: 165 LLFSFVLQILALISPLFFQVVMDKV----LVHQAWSTLDVLV-FGLVITGVIEVVLRGLR 219

Query: 85  VYLLAIFERRIFARVVAEITVRAVHAQNPFFVDESRGSLFNRYFDMVIVQKSVPSLVIGA 144
            Y  A    RI  ++  ++          FF     G++  R  ++  +++ +   +   
Sbjct: 220 EYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSMFTL 279

Query: 145 FTIVLQGAVGLVVTSFYH-PFFLAFNLVLVTVCLMIWLAWRHGAITGAVG--VSHAKHNA 201
              +L   V L V S    P    F   +    L+ W  W    +  A+    SHA  N 
Sbjct: 280 TVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAW--WLTPRMQAAIEKQFSHAAANT 337

Query: 202 AHWLESVGGSNGFYKSARHLNFAM---DRSETVIADYIAAHRRYFRYSFAQTLGYFLVYA 258
           +   E+V GS      A    F     +++E ++       +   R +    L    +  
Sbjct: 338 SFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQL----LQK 393

Query: 259 FAAAALLALGGNLILAGQLSIGQLVAAELILSGVFYGIYQLGSYLDTFYDLVASSEELSQ 318
             + A+L LG   +L+ +++IGQL+A  ++ + +   + ++      F     + E+L  
Sbjct: 394 ITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGD 453

Query: 319 ILAIPQERLGQRGEAPRDGSVRFR--------DVEIDKAQINFEIASGEQAVILAEPGM- 369
           +L +P E+          G++ F+        D+      ++ +I +GE   ++   G  
Sbjct: 454 MLNLPVEQHTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSG 513

Query: 370 ESALALLLKRHAAPDSGIVLIGGSELGSFDMYLLRSAV-MVLNRPTIIDVTLREYLSFAE 428
           +S LA LL R  +P+ G + I G  L   ++  LR  V +VL    +   ++ E ++ ++
Sbjct: 514 KSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSK 573

Query: 429 GRDMDGARIMNALERVGLGARLARLPHGLDTQLASSGSPLSIVEVMQLKLANALLSRPRV 488
             +     I+ A +  G    + +LP G DT LA  G  LS  +  +L +A  LLS P+V
Sbjct: 574 P-EASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKV 632

Query: 489 LLLSQ---LYDMMPIASLKATLAELRAAGTTVLLSSGR 523
           L+L +     D    A ++A +A + A G TV+  + R
Sbjct: 633 LILDEATSALDDESQAVIQANMASI-ARGRTVITIAHR 669