Pairwise Alignments

Query, 437 a.a., Replication-associated recombination protein RarA from Sphingobium sp. HT1-2

Subject, 361 a.a., Holliday junction branch migration DNA helicase RuvB from Synechocystis sp000284455 PCC 6803

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 51/276 (18%)

Query: 7   SDDVLPAGIDHAPLADR----LRPAVLADVVGQEHLT-----GPDGAIGRMVAAGRLSSI 57
           S +V+P     +P  ++    LRP  LAD +GQ  L          A GR  A   +  +
Sbjct: 21  SPEVIPQERSTSPELEQQEASLRPQRLADYIGQRDLKEVLRIAIQAAQGRQEA---IDHL 77

Query: 58  LFWGPPGTGKTTISRLLADAVGMRFEPISA-VFSGVADLKKVFAAAKDHGRRGEKTLLFV 116
           L +GPPG GKTT++ +LA+ + +R +  +A       D+  +  A +         +LF+
Sbjct: 78  LLYGPPGLGKTTLALILAEEMQVRCKITAAPALERPRDITGLLLALQ------PGDILFI 131

Query: 117 DEIHRFNRAQQDSFLPFVED--------------------GTVTLVGATTENPSFELNAA 156
           DEIHR NR  ++   P +ED                       TLVGATT+  S  L + 
Sbjct: 132 DEIHRLNRLTEELLYPAMEDFRLDITMGKGQSAKVRSLKLAHFTLVGATTKVGS--LTSP 189

Query: 157 LLSR-AQVLILRRLDADALEQLLDRAEALIGRPLPLDIAAREALLASADGDGRF---LLN 212
           L  R   +  LR  + D L+Q++ R   ++   + +     EA+   A G  R    LL 
Sbjct: 190 LRDRFGLIQRLRFYEVDELQQIILRTAGILS--VSISPTGAEAIAMRARGTPRIANRLLK 247

Query: 213 QVETLYSIDIPAPLDPAGLSALLHRRVAVYDKDREG 248
           +V     +     +DP    AL    + +Y  D+ G
Sbjct: 248 RVRDYAQVKQQPEIDP----ALASEALDLYQVDKRG 279