Pairwise Alignments

Query, 474 a.a., Two-component transcriptional response regulator, LuxR family from Sphingobium sp. HT1-2

Subject, 450 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  256 bits (653), Expect = 1e-72
 Identities = 165/469 (35%), Positives = 257/469 (54%), Gaps = 24/469 (5%)

Query: 9   EKPFELCVVIDDDDDILLAARLLLRAIFGEVLTFRD--PESAFAATAGLTP-EAFLLDAN 65
           E+P    +V++D+ D         RA+  ++LT      ESA +    +   +A   D  
Sbjct: 2   EQPKLHILVVEDEPD--------QRALIVQMLTANQYLVESADSVEQAIVMIKASAPDLV 53

Query: 66  FSRGATNAAEGFEWLGRFLARDPQAVIVMITAHAGVQVAIEAMKRGATDFVTKPWSNERL 125
           FS        G + L       P    ++ TA+  +  A++AM+ GA D++ KP+  + L
Sbjct: 54  FSDWKLGQLTGMDLLNYVRREHPDMGFIIATAYGTITHAVDAMQAGADDYLAKPYQRQSL 113

Query: 126 LATVRTAAALRASRKAVAQKDKVAMIAAAPAGETPLLGTSPAMARVQQLIDRAAPTDANV 185
           L  +   A   A ++   Q  +++   +       L+G S  M +V Q + R + TDA V
Sbjct: 114 LLAIEKVAKSIALKR---QNRRLSSELSQQQELVGLVGRSALMQKVYQRVQRVSATDATV 170

Query: 186 LILGENGTGKELVARELHRRSRRAERIMLPVDLGAVAESVIDSELFGHVKGAFTDARADR 245
           LI GE+GTGKEL AR L++ S R+ +  + ++ GA+ ES+ ++ELFG  KGA+T A   +
Sbjct: 171 LIGGESGTGKELAARALYQLSARSHKPFVAINCGAIPESLAEAELFGAEKGAYTGANTQK 230

Query: 246 IGRLQAADGGTLFLDEIGNLPLHLQPKLLTALEQRKVTPVGANKPVPVDIRVIAATNLSA 305
           IG+L+AADGGT+FLDEIG LPL  Q KLL  L++  ++ +G N  + +D+RVIAAT+   
Sbjct: 231 IGKLEAADGGTVFLDEIGELPLLQQTKLLRFLQEGVISRLGQNSEIKLDVRVIAATHRDL 290

Query: 306 GQIADEGRFRQDLLFRLNTVEIVLPPLRERREDIHALIAHYHALYARKYAQPVHPIAPEL 365
            Q   EGRFR+DL +RLN V I +P LRER EDI  L+ H+  L+A +Y   V  ++ + 
Sbjct: 291 QQEVAEGRFREDLYYRLNVVPIHMPALRERPEDIGRLVEHFLKLHANQYGMEVPKLSRDT 350

Query: 366 MAALVAYDWPGNVRALRHAIERAVILAGDAPFGIEDIPLRSHGSPEPVRIDRAAVVEAPP 425
           + +L+ + WPGNVR L + IER V+L  +     E++      +P+P+   R  + EA  
Sbjct: 351 LKSLLDHSWPGNVRELANRIERFVLLGDE-----EEMVQELGAAPQPLDTKRFVLPEA-- 403

Query: 426 TPDDMNLERVERRLVETALMKHGYNISSAAAELGLTRASLYRRMEKHGL 474
               +  E  E+  +  AL +   N + AA  LGL+  +   R+EK+ L
Sbjct: 404 ---GIEWESFEKDCLRQALDRFEGNRTKAAKCLGLSYKAFLYRLEKYQL 449