Pairwise Alignments

Query, 834 a.a., Acidobacterial duplicated orphan permease (function unknown) from Sphingobium sp. HT1-2

Subject, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 51.6 bits (122), Expect = 9e-11
 Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 11/177 (6%)

Query: 250 NIPDQFFGGRRFNQGDDMNFALVNVRDVHLGRAQNGSMTPGNDRGSIITFAIVALLILGM 309
           NI  +    R  N+ D+M+F  +    V  G  Q  SM       + ++F     LI+G+
Sbjct: 247 NIQKKLMMSRHVNE-DNMDFT-IRSPTVFEGPEQIISMLT-----TFLSFIAGISLIVGV 299

Query: 310 ACVNFVNLATARASQRAREVALRKVLGANRRQLVLQFIGESILVSAVAMLVALALTELLL 369
             ++  N       ++ RE+ + K +GA  + ++L F+  S ++  V   + L L  +L 
Sbjct: 300 TGIS--NTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILS 357

Query: 370 PLVSRFL--DADLSLHYFGSGGLILPIIGLVLLVGVAGGAYPAFYLSRFQPARVLKA 424
            ++  F+    D S  +  S   ++  IG  L  G+  G  PA+  S+ +P   L++
Sbjct: 358 QIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRS 414



 Score = 40.4 bits (93), Expect = 2e-07
 Identities = 84/432 (19%), Positives = 163/432 (37%), Gaps = 39/432 (9%)

Query: 422 LKANKSAADAEGSGRLRSALVVAQFAVSIGLIIC--TAVVYAQTLYARNSDPGYKREGLI 479
           LK    A+    S +LRS + +    + I  +I   +A  Y  T  +   +     E  +
Sbjct: 4   LKLFNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITL 63

Query: 480 QISGI--SRRQLDPVLDTMVREIEKVDGVTSVGRTNIGISTTNNTNSGILVPGREEPISM 537
             S    S    DP L  M  ++  ++G++ +   ++ +ST N         GRE     
Sbjct: 64  TASAAQGSDDDEDPELTDM--DVLILNGISDIEYVDVRVSTRNEVR---FAGGRETATIT 118

Query: 538 GIYQVDTKFFDTM-GIKLLAGRSFDINRPIDDITRPFPEVPEAERAFAARGANTVVNELA 596
           G   VD   +  M   +L AGR    +     I   +      +R        T+ N+  
Sbjct: 119 G---VDPAVWSQMTDEELSAGRLLQASDSNAVIISYYTATEAFDREIGINQMITIGNK-Q 174

Query: 597 VKRLGFASPQDAIGKQVRGGLVRDEFGGSVPITIIGVVQDSRFRSIRDPMDPIFFLFDRD 656
            K +G     +  G    GG+  +             + D    SI +  + ++      
Sbjct: 175 FKVVGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVY------ 228

Query: 657 NHNEMLIRYHGNPATVLARIESVWKRLAPEVPFTARFSDDIVRE--VYHAEEARAQAFAA 714
             +E++   + +     A +E++ K+L           D  +R   V+   E        
Sbjct: 229 --DEIIFTLYEDVNQTTA-LENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTT 285

Query: 715 F----ALLAVIVGCLGLFGLSAFTAQRRTKEIGIRKVLGASTGKIVQLLVWQFT------ 764
           F    A +++IVG  G+      T   +T+EIGI K +GA    I+ L V+         
Sbjct: 286 FLSFIAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVG 345

Query: 765 --RPVLIANLIAWPVAWWVMRDWLNGFDSRIALTPLPFLLAGGLALLIAILTIGAHSFRV 822
               +++  +++  + W++ +   + +  +  L+    ++A G +L   I+     ++  
Sbjct: 346 GFLGLVLGTILSQIIVWFIAQSMDSSY--QFVLSIKSVVIAIGCSLAAGIIAGIIPAYNA 403

Query: 823 ARTNPINALRYE 834
           ++  P+ ALR E
Sbjct: 404 SKLKPVEALRSE 415