Pairwise Alignments

Query, 508 a.a., Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) from Sphingobium sp. HT1-2

Subject, 511 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  491 bits (1264), Expect = e-143
 Identities = 242/490 (49%), Positives = 323/490 (65%), Gaps = 1/490 (0%)

Query: 20  LVLALSNFMVVLDLTIANVSVPHIAGNLGISGDQGTWIITSYAVAEAICVPLTGWLALRF 79
           L LA++NF+ +LD TIANVSV +IAG+LG S  QGT++ITSYAVAEAI VPLTGWLA RF
Sbjct: 22  LCLAMANFLAILDTTIANVSVSNIAGSLGTSTSQGTYVITSYAVAEAISVPLTGWLASRF 81

Query: 80  GVVRTFIWAMIGFGFFSMMCGLSTTLGMIVAARLGQGICGGPIMPMSQTLLLRIFPPEMR 139
           G +R F+   + FG FS++CGL+ ++  +V  R+  G  GGP+MP+SQTL++RIFP    
Sbjct: 82  GSIRVFVTCFLLFGVFSLLCGLANSMSTLVMFRVLLGFVGGPLMPLSQTLMIRIFPKNKS 141

Query: 140 PRAMGLWAMTTLLGPAMGPIVGGYISDNWSWHWIFFINLPIAALCVFAAMAMLRPVETDT 199
             A+G+W+MTTL+ P MGPI+GG + D  SW +IFFI +P A         +L+  ET T
Sbjct: 142 HAAIGIWSMTTLVAPIMGPILGGVLCDQLSWPYIFFIKMPFAIAAALLCWKLLKKFETKT 201

Query: 200 AHQPIDKIGLCLLIFWIGCLQVMLDIGRDHDWFSDPLILTLAILAGIGFIVFIIWELTEE 259
            H  IDK+GL LL+ W+  LQ+MLD G+DHDWF    I+ LA++A IGFI F+IWELTE 
Sbjct: 202 THSKIDKVGLALLVVWVAALQLMLDEGKDHDWFESSRIVFLAVIAVIGFIAFLIWELTER 261

Query: 260 HPIVDLRVFRHIGFSSGVFTLALAFGAYFSSIVVIPQWLQMSMGYTATWSGIVTAFTAMA 319
           +P+VDL+VFRH G+S  + TL+LAFGA+FS  VV P WLQ+ MGYTAT SG  TA   + 
Sbjct: 262 NPVVDLKVFRHRGYSISMVTLSLAFGAFFSISVVTPLWLQIYMGYTATISGHATASMGIL 321

Query: 320 AVMSAPFAARFTGKVDPRIMISGAVFWLGCMTLWRAHWTSGIDFFGLALPQFVQGFAMPF 379
           AV  AP  A  + K DPR  +   V WLG  T  R   T  + F  ++ P F QG  MP 
Sbjct: 322 AVFLAPIVANLSSKFDPRPFVFAGVMWLGLWTFMRGFNTVDMTFSQISWPLFFQGIGMPL 381

Query: 380 FMIPLTTLTLGSVPPSETASAAGLQNFLRTMAIAIATSLVLTGWSDSQRVSRNELAGAL- 438
           F +PLT + LGSV P E  SAAGL NF+RT++ A ATS++ T W    R    ELAG   
Sbjct: 382 FFVPLTAIALGSVKPHEMESAAGLMNFIRTLSGAFATSMINTSWEHETRYVHAELAGLTD 441

Query: 439 QPDDAQRALSGMGMTTEQIRQTISNLVEQEAIAISVDYVFFISALVLFAAAVIVWLAPKP 498
           +   A +A+   GM+ EQ R  +  +++ +++ ++ + +F + AL+   AA ++W APKP
Sbjct: 442 KAGVATQAMQNSGMSAEQTRSAMDWILQNQSVMVATNQLFIVIALIFVFAACMIWFAPKP 501

Query: 499 SGPVDTSAAH 508
              VDTSA H
Sbjct: 502 KQAVDTSAVH 511