Pairwise Alignments

Query, 294 a.a., Flagellar motor switch protein FliM from Sphingobium sp. HT1-2

Subject, 343 a.a., flagellar motor switch protein FliM (RefSeq) from Shewanella sp. ANA-3

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 2/290 (0%)

Query: 5   QSFAFGRGDAQAPVMLSGLDRLGEKLGRRIRALIEPISGIRPHVVAEDARVVEFGAWSAG 64
           +S+ F   D      +  L+ + E+  R +R  +  +      V     ++++FG +   
Sbjct: 34  RSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSINGVQMLKFGEYVHT 93

Query: 65  APNFCSLSIYRLLPLKGQMLLCMDATMISTLVDCFYGGLGNRALPARG-EFTPTEDRLIA 123
                SL++ R  PLKG  L+ M+A ++  LVD F+GG G       G EFTPTE R++ 
Sbjct: 94  LFVPTSLNMVRFHPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQ 153

Query: 124 RLSETIMARMVECWSEVLPLEPGLLLRETGIGFAAAAQPADQMVVQRFRVGLDRDREWSI 183
            L + I     + W+ V+ +E   L  E     A    P + +V+  F + +D       
Sbjct: 154 LLLKIIFEDYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVINSFHIEVDGGGG-DF 212

Query: 184 DMVFPLAALRGVEALMGSKVASDDEHVDPVWQARVARRMRDIRLPARTVLARPNLSLAEL 243
            +  P + +  +  L+ + V SD +  D  W   +   + D+++     +    L+L ++
Sbjct: 213 HITMPYSMIEPIRELLDAGVQSDKQDTDMRWSQALHDEIMDVKVGFDASVVEHELTLKDV 272

Query: 244 MQLKAGDIIPVTIGRSLPLIVGDRIVAHGTIGEQDGRAAFQIEKIAQGPE 293
           M  KAGDIIP+ +   + + + D       +G      A +I +    PE
Sbjct: 273 MNFKAGDIIPIELPEYIMMKIEDLPTYRCKMGRSRDNLALKIYEKIPRPE 322