Pairwise Alignments

Query, 582 a.a., Flagellar M-ring protein FliF from Sphingobium sp. HT1-2

Subject, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

 Score =  174 bits (441), Expect = 9e-48
 Identities = 132/452 (29%), Positives = 228/452 (50%), Gaps = 35/452 (7%)

Query: 61  VAVAGAAWLALREPPQRDLFRGLPDGDKSAVAQVLDQNGIKYDFDNAGGMTVGEGDYFKA 120
           VA+    +  +REP  R L       +   V   LDQ   +Y  D    + V   DY   
Sbjct: 66  VALIVMLFFWVREPDMRPL-GAYETEELIPVLDYLDQQKQQYKLDG-NTILVPVSDYNSL 123

Query: 121 KMMLAAQGLPKSAPDGNSMI-DSLPMGASRAVENEKLRGARETDLARTIEAIDSVESAKV 179
           K+ +   GL ++   G+ ++   +  G S+ +E E+L+ +RE  LA+ IE +  V  A+V
Sbjct: 124 KLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQLAKAIEEMRQVNKARV 183

Query: 180 HLAVEAPSVFLRERTKPSASVMLRLSQGRTLTDAQVSAIVHLVASSIPELNPEDISVVDQ 239
            LA+   SVF+R   + SASV L +  G  L   ++ A+V +VAS++P + P  ++V DQ
Sbjct: 184 LLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVASAVPGMKPSRVTVTDQ 243

Query: 240 NGRLLSNNDG---NAADDRQLAIQTRIEDRYRQSVVALLTPILGDGKFSAEVHAELNFAE 296
           +GRLLS+      +AA  ++  ++ + E+  R  + ++L PILG G ++A+V  EL+F+ 
Sbjct: 244 HGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIPILGLGNYTAQVDIELDFSA 303

Query: 297 RQATRESFPQDEARLRAEQGSWSSDERGQKAGEASGIPGALSNQAPVNPTVTQTNPNGQA 356
            + TR+ F  +    R+E     + E        +G+PGALSNQ P + ++ Q       
Sbjct: 304 VEQTRKVFDPNTPATRSEY----TLEDYNNGNVVAGVPGALSNQPPADASIPQ------- 352

Query: 357 VTQGQTAEQQQPATPGLPPMKTEETFNRSFELGREVSVTKDAVGTVKRLSVAVAL----- 411
                 A+ +  +  G   +  E T  R++EL   +S  +   G + R +VAVA+     
Sbjct: 353 ----DVAQMKDGSVMGQGSVHKEAT--RNYELDTTISHERKQSGVINRQTVAVAVKSRSS 406

Query: 412 ---DTG-ADGKPRSAQEIAALEALVKGAVGFDQARGDVVALSARSFAKAEE---VKAPWY 464
              DTG     P S  ++ ++  ++ G VG+ + RGD++ + +  FA+ E    V  P +
Sbjct: 407 VNPDTGEVTYTPLSEADLNSIRQVLIGTVGYSENRGDLLNVLSMPFAEPEMEQIVDVPIW 466

Query: 465 EADWMSPLIRNVSALLVALLVIFGIGRPLLKR 496
           E    +  +R  ++ LV ++VI  + RP +K+
Sbjct: 467 EHPNFNDWVRWFASALVIIIVILVLVRPAMKK 498