Pairwise Alignments

Query, 351 a.a., Flagellar motor rotation protein MotB from Sphingobium sp. HT1-2

Subject, 251 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 23/180 (12%)

Query: 106 GNLAITIPRDATGTKDQGGKA-----LRAADRQKFENIKKQLEDRMSKKGLARLRKNVRF 160
           G +  T+  D+   + Q   A     + A  +Q    +  Q E + +K  LA+LR++   
Sbjct: 69  GMIGQTVANDSEIKQQQATLAEQESRMMALKQQNEALLTVQQEYQEAKVELAQLRQH--- 125

Query: 161 TETREGLRIDLIDEADFAMFRSGTDQLLPEAKALIAEVADALATMPN-PLIVRGHTDGLP 219
               +G R++ +       F++G+  + P  ++ + EVADA+A  P   L + G+ D   
Sbjct: 126 ----QGTRLEELALGLNVQFKTGSSTVEPHFQSQLNEVADAMAISPQLKLDLTGYAD--- 178

Query: 220 YASGRSMNNWMLSSARAESTRKALAETGIPNARF-ARIEG----VADREPFVKSDAYDPR 274
              G S  N  LS  R    R  L   G+  AR  A+  G    V D + F ++D +D R
Sbjct: 179 -RRGDSSYNQALSEQRVAEVRSYLVSKGVDEARLDAKAYGASAPVKDEQSF-ENDFFDRR 236