Pairwise Alignments

Query, 351 a.a., Flagellar motor rotation protein MotB from Sphingobium sp. HT1-2

Subject, 243 a.a., chemotaxis MotB protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 71/254 (27%), Positives = 110/254 (43%), Gaps = 31/254 (12%)

Query: 27  GGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTEKQRKALADYFTPTLVELKMNSAGSTG 86
           GG  GG+WKVAYADFVTAMMAFFLLMW+L  T+++ ++ LA YF+    +++ N+     
Sbjct: 3   GGKGGGSWKVAYADFVTAMMAFFLLMWILNMTSKETKEGLAGYFSSDAAKMQSNNVSPVA 62

Query: 87  MFGGDSLMAKENYPTTGGQGNLAITIPRDATGTKDQGGKALRAADRQKFENIKKQLEDRM 146
                               N       D   T+D     +   +R  +  I ++L   +
Sbjct: 63  --------------------NNPFVQSTDKLDTRDF---KITEVERSHYA-IAQKLRQML 98

Query: 147 SKKGLARLRKNVRFTETREGLRIDLIDEADFAMFRSGTDQLLPEAKALIAEVADALATMP 206
                 +    +   +    LR++        M+  G+ +L PE   ++ +V   L    
Sbjct: 99  MADATPQSASGISADDVGVQLRVN-----SDIMYAPGSAELAPEGAKVLDDVIRILKEYN 153

Query: 207 NPLIVRGHTDGLPYASGRSMNNWMLSSARAESTRKALAETGIPNARFARIEGVADREPFV 266
             L+VRGHTD     +    +NW LS ARA +  + +   G       R    AD  P  
Sbjct: 154 LYLVVRGHTDSGEPRNSIYPSNWELSGARAAAAVRYIITHGEIKPTRLRSIAYADTRPLE 213

Query: 267 KSDAYDPR--NRRM 278
            + + D R  NRR+
Sbjct: 214 PNTSPDSRAKNRRV 227