Pairwise Alignments

Query, 963 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 943 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  241 bits (616), Expect = 1e-67
 Identities = 229/860 (26%), Positives = 367/860 (42%), Gaps = 85/860 (9%)

Query: 128 IIVTGYAASLSGALAEKRKATNVVDVVKAEDIGKFPAQNIAEALQRVPGVSIVRDRGEGV 187
           I V G   +LS ++  +R A NV+ VV A+ +G FP  NI+E+LQRVPG+SI RD+GEG 
Sbjct: 138 IRVVGQQGALSKSMNRQRGADNVLSVVSADVLGNFPDSNISESLQRVPGLSIERDQGEGR 197

Query: 188 FVRIRGLGANFQVVTLNGRSAAVNENVRDSGQSGRQFRFDTLPSELMSAVEVIKSPRADL 247
           FVR+RG+  ++  V++NG      E+ R      R    D +PS+L+ +VEV K+   D+
Sbjct: 198 FVRVRGMAPDYNSVSMNGTRLPSPESDR------RAVALDVVPSDLLQSVEVSKTLTPDM 251

Query: 248 AEGGIGGIVNLQTFRPIDLKKPVLALSATASSPRLADTVDPRLSGMASWVNEEGTFGALI 307
               +GG + +++    D     L L+  AS   L D ++P+L+   S +  E   G  I
Sbjct: 252 DADALGGAIEVKSLSAFDRDDTYLNLNTEASQDTLTDNINPKLAASYSDIIAE-NLGIAI 310

Query: 308 AAVYDERTTRQDRV-TGVGWADGRIDTDGDGTLDSDTILVPTSTRPTLERENRNRIGLNG 366
           A  +  R    D V TG  WA        D   D D  L     R      NR R+G+  
Sbjct: 311 ATSWYNRDFGSDNVETGGDWAFAE-----DSGFD-DAALASVDARD--YEINRERLGVGV 362

Query: 367 AIQWKPDDRFELNVDGLWSRLNIDYDELTYSTDFSATTPGAIVPGTAVIENGVLTAATVN 426
              ++P D  +L +  L+S    ++D+    T  SA T          +  G        
Sbjct: 363 NFDYRPSDDTDLYLRTLYS----EFDDT--ETRNSAKTKWKSAQQADALSQG-------K 409

Query: 427 TSTQIGRETSRLEYENWLIGANAKWSANGWTLAADASLGRAYSNTPTPIYRTRLLGSVGQ 486
           T+  +   T      ++++G   ++  + WT    AS   A +  P  I     +  +  
Sbjct: 410 TTRSLKSRTENQNITSFVLGGQTRF--DRWTFDYQASHSSASAEKPRDIAGADFVAKIDN 467

Query: 487 VAFDYGKVGERLPNLEFLTADLTESTTLPGRRIEYRVNDSLDRQRAATFDVTRELS--GV 544
             F       + P +     D  ++       IE   + + D   A   D+TR+L+    
Sbjct: 468 TGFS----NTQTPQI-IAPEDYYQNANFELDEIEIAASKAEDTINAVNVDLTRQLTLGDY 522

Query: 545 VQSLRFGAKYEKRDRTYNRRDINFTSGIAGQRFDD-----SYFEAFPVDDFLSGVGGNLP 599
              ++ G K  +RD++ NR DI   S +  Q   D     S +    +D  L   G  + 
Sbjct: 523 SAEVKTGVKVSRRDKS-NREDIWIYSDLGDQGVSDDALLLSQYAGNELDYSLGRFGTGI- 580

Query: 600 TNWVMPDPDRFWDAATGKEALLDAPLTRGDRR---NSYAIDERIIGGYGMAEFSLPLGGV 656
                 D    W+        LDA   R +     N + I E I   Y M    +     
Sbjct: 581 ------DSTPVWELVNS----LDADDNRDEVESTINDFDITEDINAAYLMGHMDIG---- 626

Query: 657 TIRGDTGLRYAHTR--QTSSGYADNGSAALPVSYERNYGNFLPSLNLVVEFTSNLQMHLA 714
            +R  TGLR    +   T SGY       + +++  +  ++LP+L+L   +T N  +  A
Sbjct: 627 KLRILTGLRVEQNQWDSTGSGYDGAKDEFIDINHSSDEDHWLPALHLTYRYTDNTVLRAA 686

Query: 715 ASKVITRPSLADLAPRLTINSNPTVLTAVGGNPELRPFEAWQYDGTVEWYFAPGSALIGG 774
            +  + RP+   LAP   +  +   +    GNP+L+  E+   D ++E YF     +  G
Sbjct: 687 WTNTLVRPTFGQLAPGYLLEEDDGDIDLTFGNPQLKSLESMNVDLSLEHYFGNIGLISAG 746

Query: 775 AFYKDITTFVFQQTRNFDLDG-----QIYRLTAPQNGGNAYVAGIEIAYQQLFKMLPAPF 829
            FYKDI  F++Q     DL G       +      NG +A + G+E++Y Q F  LP PF
Sbjct: 747 LFYKDIENFIYQA----DLAGLGDYVDAHSAVTFVNGDSADIYGLELSYVQEFHFLPEPF 802

Query: 830 DGLGFQANYTHTKSKGTYA-LSDGTTF-RDKLTDVAGD-SFNLTAFYEKGPVGARASYSW 886
           + L   +N T+T S    + + DG    RD       D + NL+  YE        S ++
Sbjct: 803 NALVLNSNLTYTDSSANISWIEDGQLLSRDIPMPSQSDLTANLSLGYENSYASVWLSAAY 862

Query: 887 RGKVLRDVGGAG-----LAANNDAAFGSLDFDISYKVTPNVTFVVQGINVAGGVQWQYVR 941
           + + L++V         L  +N   +   DF     +T NVT   +G+N+     + Y  
Sbjct: 863 KSEYLQEVTELSDERLDLYQDNHLQW---DFVAKAHLTSNVTLYFKGVNLTDEPYYSYTG 919

Query: 942 DDRF-AGYTDYGTTLMAGVR 960
           +  + A Y  YG T   G++
Sbjct: 920 NSAYNAQYEAYGRTFQLGLQ 939