Pairwise Alignments

Query, 450 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 80.9 bits (198), Expect = 8e-20
 Identities = 84/301 (27%), Positives = 136/301 (45%), Gaps = 22/301 (7%)

Query: 132 LLGPDTRLIVGRSNVRARALQTRLAIAFAIAGAIVALLSLAAGHFAARRLRRRVERINHV 191
           LL PD+   V ++  RA      L   F + G   AL  +    F +RRLR  +ER+ H 
Sbjct: 122 LLKPDSHSPVYQAIDRA----DNLLFVFMLGG--FALYCMFLIWFLSRRLRE-LERVTHD 174

Query: 192 FDAVRAGDIGARARATGASDELAELAANTNAMLDQVQRLMEAQRSVSDQTAHEIRTPLMH 251
           F     G++ ARA +T +S  + +L  + N M D++  L+ + +++++  AH++RTP+  
Sbjct: 175 F---ANGNLQARA-STKSSKSVGKLNHSFNMMADKISHLILSNKALTNAIAHDLRTPIFR 230

Query: 252 LDTRILKAMERTDDEGLLRTLGRSRDEIRSVVRLLDSLLDIAGTQALRGDRRGLADVDLS 311
           +  +     E   +    + +    ++   +  ++D LL  A  +    D +        
Sbjct: 231 IQWQAEVLAESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKLEHPESDIQS----QYL 286

Query: 312 EIADNLADLYGASA--EDLGIAFNAMVAPGISFRADPMQITRLLSNLLDNAFKYVPRGGS 369
           E+   LAD     +    L I +   + P +   ADP  +TR L NL+ NA KY      
Sbjct: 287 EVNQWLADFIDEQSHKSSLQIQYLPSLQP-LMLDADPQLLTRALVNLIRNAEKYAGDRLL 345

Query: 370 VLLSLAPGPL-IIVQDNGRGIPADARELVFDRYVRLDPSPG---SGHGLGLALARAIAER 425
           +  S     L I + DNG GI       +FD +   D S     SG GLGLA+ + I  R
Sbjct: 346 IEASTVDAKLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRNKAQSGFGLGLAIVKQIMAR 405

Query: 426 H 426
           H
Sbjct: 406 H 406