Pairwise Alignments

Query, 700 a.a., ATP-dependent DNA helicase RecG (EC 3.6.4.12) from Sphingobium sp. HT1-2

Subject, 692 a.a., DNA helicase RecG from Vibrio cholerae E7946 ATCC 55056

 Score =  458 bits (1178), Expect = e-133
 Identities = 270/642 (42%), Positives = 389/642 (60%), Gaps = 29/642 (4%)

Query: 29  LKGIGPALARPLERLGLARAVDVAFHLPVNYVDRKLIDELDMADAGKVIGIMLTPVDYRA 88
           L G+G  +A  LE++GL    D+ FHLP+ Y DR  +  +     G    +    +    
Sbjct: 13  LSGVGAKVAEKLEKVGLHTVQDLLFHLPLRYEDRTRVYPIVQLHHGLWAAVQGKVMAVDT 72

Query: 89  SGNARAPFRVQAVDAHGNAVSLVYFGRNSAWPRKLLPLNEPKFVS--GKLEAYGDNLQMV 146
               R    V+  D +G  ++L +F   +A         E KFV   G+++     L+++
Sbjct: 73  LFGKRKMLTVKISDGNGT-LTLRFFNFTAAMKNNFA---EGKFVHAYGEIKRGNQGLEII 128

Query: 147 HPDYVL--PPEEADTVPARESVYGLSEGLTNNRMRDLVGQALARAPELP-EWIEPSLLAS 203
           HPDY    P +  D  P    VY  +EGL    +R+L  QAL    +   + + PS L  
Sbjct: 129 HPDYKFFTPAQTPDVEPNLTPVYPTTEGLRQLTLRNLTDQALVLLEKSAVQELLPSGLYD 188

Query: 204 KGWPAWRAALERFHADPTDAQ----------ARERLAYDEIFAGQLALMLVRQSSRRRRG 253
           +     +A L+  H    D            A+ RL  +E+ A  L+++ +R   ++   
Sbjct: 189 QQMTLAQA-LKIIHRPSADIDLRLFEQGRHPAQIRLIMEELLAQNLSMLAIRSQGQQDVA 247

Query: 254 VPISGDGRLRAML--KLPFAPTGAQRRAIGEIEGDMAQATPMLRLLQGDVGSGKTLVALM 311
           +P++   +L+  L  +LPF+PT AQ+R + EIE D+A+  PM+RL+QGDVGSGKTLVA +
Sbjct: 248 LPLAPVHQLKQQLLAQLPFSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGSGKTLVAAL 307

Query: 312 ALLNAVEAGMQGAMLAPTEILARQHYETLRKMASGLPIEIAILTGREKGKVREATLMGLA 371
           A + A+E G Q A++APTE+LA QH     +    + I++  L G+ KGK RE  L  +A
Sbjct: 308 AAVRAIEHGYQVALMAPTELLAEQHALNFAQWLEPMGIQVGWLAGKLKGKARETELARIA 367

Query: 372 NGSIHILVGTHAIFQEKVQYKALGLAVIDEQHRFGVAQRMMLASKAERS---PHLLVMTA 428
           +G + ++VGTHA+FQE+V +  L L +IDEQHRFGV QR+ L  K  +    PH L+MTA
Sbjct: 368 SGEVKMVVGTHALFQEQVSFDHLALVIIDEQHRFGVHQRLELREKGAKQGAYPHQLIMTA 427

Query: 429 TPIPRTLTLTYYGEMDVSRLDEMPPGRQPIQTLVMSANRLDEVVEGLARH--VEGGGQAY 486
           TPIPRTL +T Y +++ S +DE+PPGR PIQT+ +   + DE+VE + RH  +  G QAY
Sbjct: 428 TPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDEIVERI-RHACLNEGKQAY 486

Query: 487 WVCPLVEESETSDQAAAEMRAETLRQRFGD-RVGLVHGKMKGPDKDAAMEAFAANRTQIL 545
           WVC L++ESE  +  AA   AE L+++  + ++GLVHG+MK  +K A M+AF  N   +L
Sbjct: 487 WVCTLIDESEVLEAQAAAETAEELQRKLPEVKIGLVHGRMKPAEKQAVMQAFKNNELHLL 546

Query: 546 VATTVIEVGVDVPNSSLIVIEGAERFGLAQLHQLRGRVGRGDKPSVCLLLRGNALGETSR 605
           VATTVIEVGVDVPN+SL++IE  ER GLAQLHQLRGRVGRG   S C+LL    L +T++
Sbjct: 547 VATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGTVASHCVLLFHAPLSKTAQ 606

Query: 606 ARLALMRETNDGFRIAEEDLKLRGAGEVLGTRQSGEAELKIA 647
            RL ++RE+NDGF IA+ DL++RG GE+LGT+Q+G A+ KIA
Sbjct: 607 KRLGVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIA 648