Pairwise Alignments

Query, 358 a.a., Potassium efflux system KefA protein / Small-conductance mechanosensitive channel from Sphingobium sp. HT1-2

Subject, 275 a.a., hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 13/201 (6%)

Query: 81  IWSIGARMVFALLVGWLVFRAMRAGKAMLEARADISVEDNLKARR-QRTKISILYRICQC 139
           I + G +++FAL++ ++       GK        + V   L +R+   T +S +  +   
Sbjct: 15  IMTYGLKILFALVIFFV-------GKYFAGVAQKV-VHKLLNSRKVDPTVVSFVANLSWA 66

Query: 140 IVGFFVIAMMLIAIPGVRTIGVSLMASAGLAALAVGAAAQPALKNLIAGIQMAFSEPIRL 199
           +V  F I   L  I GV+T   SL+A  G A LAVG A Q +L N  +G+ M    P R+
Sbjct: 67  VVFVFTIIATLGQI-GVQT--ASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRV 123

Query: 200 DDVVIIEGEWGRIEEIRLTYVIVRIWDDRRMVVPVSYFLEKPFQNWTTKTSDLLGTVFLY 259
            D +   G  G ++EI +    +R  D++ +V P S  +     N++   +  +  V + 
Sbjct: 124 GDYIEAAGIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLV-IC 182

Query: 260 VDPTADIERIRARFVEAVKAN 280
           V  +AD+ + +    E +  N
Sbjct: 183 VSYSADLAQTKKVLTEILDNN 203