Pairwise Alignments

Query, 899 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 948 a.a., TonB-dependent receptor (RefSeq) from Shewanella amazonensis SB2B

 Score = 55.5 bits (132), Expect = 2e-11
 Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 10/174 (5%)

Query: 16  ALVAPAALAQEVPAPADATTSDPQAADPAAAAGRSTAEDPEAAPDISVPGSDIIVTGRRS 75
           AL    AL       ADA  +     + A  A  +  ED E    I+V G  I  + + S
Sbjct: 12  ALAVSTALWITPVCAADAEQTTKNTEEKAKQAEEAKEEDVER---IAVYG--IRSSIKES 66

Query: 76  ANVQKNIPAVVSVLSSADIARTGDGNIAGALGRVTGLSVVGNG----YVYVRGLGDRYSL 131
             +++N  +VV ++ + DI +  D N+A AL R+ G+++  NG     + VRGLG  Y++
Sbjct: 67  MFLKQNATSVVDLVVADDIGKFPDENLAEALQRIPGITITRNGGEGQNILVRGLGAGYNV 126

Query: 132 ALLNGSPLPSPEPLKRVVPLDLFPTNIVSSSMVQKSYSANYPGEFGGGVINLTT 185
             LNG  L S E   R    D   + +V+   V KS  A       G ++++ T
Sbjct: 127 TTLNGRKLAS-EYAGRDFNFDTIASELVNVLAVYKSPEARLTEGGIGAIVDIQT 179



 Score = 43.5 bits (101), Expect = 6e-08
 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 19/161 (11%)

Query: 608 LPSGTLTWQMRDDMQVRLNASKTIARPQFRELIYQFYFDPD-TNRR------YQGNPYLQ 660
           LPS      ++DD+ +R++A++T++RP    L  + + +PD  NR+       +GNP + 
Sbjct: 678 LPSLNFRLNLQDDLLLRVSAAQTLSRPSLYAL--RTWANPDFVNRKEGLPTLSRGNPGVS 735

Query: 661 DSKLFNAEARYEWYFARDQRFTLSGFYKTIDNPIETFISLNSDAFITSFANAPKADLYGG 720
             + +  +   EWY+          F K I + IE   +           N P++  YG 
Sbjct: 736 AEEAYQGDVTLEWYYGDSSSLAAGVFVKDIQSFIENDENAMDVEGNRYMVNQPESGEYGA 795

Query: 721 -----EVELQKYFDLSSMSDSAFFSTRRLVTIANYTYTKSK 756
                EV  Q+  +    S    F  +      NYTY  S+
Sbjct: 796 LITGYEVAWQQSLEQWLPSPLDGFGVQ-----LNYTYVDSE 831



 Score = 29.3 bits (64), Expect = 0.001
 Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 8/104 (7%)

Query: 436 TNAASDPYGNLFVNRLNGNTGQTATVSFSDLNE-DLWSGGADLTWKPSADMALTAGYAYV 494
           T+A  D  G +   +  G+      ++ S   + D W  G +  W P+   ++ A  AY 
Sbjct: 346 TDAQFDDLGRVVKMKQTGDNTMVELLNISTPRQTDTWQLGLNAEWHPTDQWSVYADAAYS 405

Query: 495 DTNRTSSRRDFQFRASSDMPEGVGV------LRPDLLLAPGIVN 532
                 ++ D +F  +    + +G+        PD++++P + +
Sbjct: 406 QA-ENKNKGDNRFIVARGFVDSIGIDYSTGNTLPDVVISPALTS 448